| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1896 |
|---|
| Symbol | |
|---|
| ID | 5084321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1941785 |
|---|
| End bp | 1943917 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640483457 |
|---|
| Product | catalase |
|---|
| Protein accession | YP_001168092 |
|---|
| Protein GI | 146277933 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATG ACAAGCCCGC TTCGCGTCCT GGAAGTTTCG AGAACCTCGT GTCCGACTAC
GGGGCCGGAG GTGAGTTCCA TCAGCACGCC GGAGACCGCG ACGACCGGCT GACCACCGCC
CAGGGCGTCA CGATCGCCGA CAACCAGAAC TCGCTCAGGG TCGGGCGGAA CGGGCCCACC
GCGCTCGAGG ATTTCGTCCT ACGCGAAAAG ATATTCCATT TCGACCATGA GCGGATCCCC
GAGCGGGTGG TCCATGCGCG CGGGTTTGGC GCCCACGGGC TCTTCGAATG CACGAAGGCC
ATCCCCGAGA TCACCCGCGC CGCGCCCTTC CAGAAGGAAG GCAAGGTCAC CGAGACCTTC
GTCCGCTTCT CGACGGTGGC GGGGTCGAAA GGCTCGATGG ATCTGGCGCG CGACGTGCGC
GGCTTCGCCA CCAAGTTCTA CACCGACGAA GGCAACTGGG ACCTCGTGGG CAACAACATC
CCCGTCTTCT TCATTCAGGA CGCGATCAAG TTCCCCGACC TCGTCCATGC CGTGAAGCCC
GAACCCGACC GCGGCTTCCC GCAAGCGCAA TCGGCGCATG ACAATTTCTG GGACTTCATC
TCGCTGACGC CCGAGTCGAT GCACATGGTG ATGTGGCAGA TGTCGGACCG CGCGATCCCC
AAGAGCTTCC GTTTCATGGA AGGGTTCGGC GTCCATACCT TCCGCTTCGT CAATGCCGAG
GGCCAGTCGA GCTTCGTCAA GTTCCACTGG AAGCCCCGGC TCGGCCTTCA GTCGGTGCTG
TGGGACGAGG CGCTGAAGGT CAACGGCGCC GACCCCGACC GGCACCGGCG CGACCTGTGG
GAGGCGATCA CGGCCGGCGA CTTCCCCGAG TGGGACCTCG GTCTGCAGAT CTTCGACGAA
GCCTTCGCCG ACCGCTTCGA CTTCGACGTG CTCGACCCGA CCAAGATCAT CCCCGAGGAT
CTGGTGCCGC TGACCATCGT GGGGACGCTG ACGCTCGACC GCGTGGTGGA CAACTTTTTC
GCCGAGACCG AGCAGGTCGC CTTCTGCACC CAGAACGTGA TCCCCGGCAT CGACTTCACC
AACGATCCGC TGCTGCAGGG CCGGAACTTC AGCTACCTCG ACACGCAGCT CAAGCGGCTG
GGCAGCCCGA ACTTCACCAA ACTGCCGATC AACGCGCCGC GCGGCTGTCC CGTGAACAAT
TTCCAGCAGG ACGGCCACAT GCAGACCGCC AACCCCAAGG GCCGGGTGAA TTACGAGCCC
AACGGCTGGG GCAAGGGGCC GCGCGCCCAC CCGCTCGAGG GCTATGTGAG CTACGCCGTG
CGCGAGGAAG GCGAGAAGCG CCGCCTCCGG CCCGAGAGCT TTGCCGACCA CTACAGCCAG
GCGCGGCAGT TCTTCCTGAG CCAGACGCCG GTCGAGCAGG GCCACATTCG CGATGCGCTG
GTGTTCGAAC TGTCGAAATG CCAGGAGATC GAGATCCGCG CGCGGATCGT GGCGCACCTG
CTCAACATCG ACGAGGGGCT GGCAGAGGCG GTCGCGAAGG GGCTGGGCCT GGCTGCGATG
CCCGATCCGG CCCCGGCGGC CCGGCCCACG CGCACCGACC TGCCCCCGTC GGACGCGCTG
AGCATCCTGA AGAACCCGCC GCCCTCCTTT GCCGGCCGGA CCGTCGGCGT CCTCGTCGGA
GACGGGGTGG AGGCCAGCCT GCTCTCGGAA CTGCGCTCGA TCCTTGCGGC CGAGGGCGCC
ATGGTCAAGC TGGTGGCCCC CCGCATCGGT GGGGTGACGG ACAGCGCGGG CGCGCTGCAC
CCGGCCGACG AGAAGCTCGG CGGCGGGCCT TCGGTGCTCT TTGATGCGGT GGCGGTGCTG
CCGGGCTCCG AGGCGGCGGC AATCGCCGCC AATCCGGCCG CGCAGGACTT CCTCACGGAT
GCCCATGCCC ATTGCAAGTT CATCGCCCAC CACGGAGCCG AGGCGCTGAT CGACGCCTGC
GCCCTGCGGG ACAAGATGGA CGAGGGTTGG CGGGCCCTCG CGGGCACGTC CGACATCGAC
AGCTTCGTCG CCGCCTGCCG AAGCCTGCGC CACTGGCCGC GCGAGCAGAC GCTGGGCGGG
AACCCTCCCC TCGTGCGGAC GTTTTCGCTC TAG
|
|---|
| Protein sequence | MADDKPASRP GSFENLVSDY GAGGEFHQHA GDRDDRLTTA QGVTIADNQN SLRVGRNGPT
ALEDFVLREK IFHFDHERIP ERVVHARGFG AHGLFECTKA IPEITRAAPF QKEGKVTETF
VRFSTVAGSK GSMDLARDVR GFATKFYTDE GNWDLVGNNI PVFFIQDAIK FPDLVHAVKP
EPDRGFPQAQ SAHDNFWDFI SLTPESMHMV MWQMSDRAIP KSFRFMEGFG VHTFRFVNAE
GQSSFVKFHW KPRLGLQSVL WDEALKVNGA DPDRHRRDLW EAITAGDFPE WDLGLQIFDE
AFADRFDFDV LDPTKIIPED LVPLTIVGTL TLDRVVDNFF AETEQVAFCT QNVIPGIDFT
NDPLLQGRNF SYLDTQLKRL GSPNFTKLPI NAPRGCPVNN FQQDGHMQTA NPKGRVNYEP
NGWGKGPRAH PLEGYVSYAV REEGEKRRLR PESFADHYSQ ARQFFLSQTP VEQGHIRDAL
VFELSKCQEI EIRARIVAHL LNIDEGLAEA VAKGLGLAAM PDPAPAARPT RTDLPPSDAL
SILKNPPPSF AGRTVGVLVG DGVEASLLSE LRSILAAEGA MVKLVAPRIG GVTDSAGALH
PADEKLGGGP SVLFDAVAVL PGSEAAAIAA NPAAQDFLTD AHAHCKFIAH HGAEALIDAC
ALRDKMDEGW RALAGTSDID SFVAACRSLR HWPREQTLGG NPPLVRTFSL
|
|---|
| |