| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1877 |
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| Symbol | |
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| ID | 5084302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1927057 |
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| End bp | 1928304 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483438 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_001168073 |
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| Protein GI | 146277914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.294016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT ATTCGGTCTT CGCCATTGCG CGCGAGGCGA TGCGCCATCA TACGGGATGG
GAGCGCGCCT GGGCCTCGCC CGAGCCCCGG CCTTCGTATG ACGTGATCGT GATCGGCGCG
GGCGGACACG GGCTCGCCAC GGCCTATTAC CTCGGCAAGA ACTTCGGGAT CACCAATGTC
GCGGTGATCG AAAAGGGGTG GCTCGGCGGT GGCAACACGG GCCGCAACAC GACGATCATC
CGCTCGAACT ACCTGCAGGA CCCCTCGGCC GCGATCTACG AGAAGGCGCG CAGTCTCTAC
GAGACGCTGA GCCAGGATCT CAACTACAAC GTCATGTTCA GCCCGCGCGG TCTTCTCATG
CTGGCACAGA CGCACCACGA GGTGCGCGGC TACATGCGCA CGGTCCATGC GAACCTCCTC
CAGGGGGTCG AGACCGAGTG GATCGGGCCG GACCAGGTCA AGCGCCTCGT GCCGATCATG
AACATCCACG GGCCGCGCTA TCCCGTGCTG GGGGCGCTGC TGCAGAAGCG CGGCGGCACG
GCGCGGCACG ACGCGGTGGC CTGGGGTTAC GCGCGGGCCT GCTCGGCCAT GGGGATGCAC
ATCATCCAGC AGTGCGAGGT GACGGGTGTC CGCGCCGAAG GCGGCGTCGT GTCCGGGGTC
GAGACGACGA AGGGCTTCAT CGGCACGAAG AAGCTCGCGA TCGTGGTGGC GGGCCATTCG
GGGCAGGTGG CCGATATGGC GGGCTTCCGT CTGCCGGTCG AGGCGGTGGC GCTGCAGGCG
CTGGTGTCCG AGCCGGTCAA GCCCTGCATC GACGTCGTGG TGATGGCCAA CACCGTGCAC
GGCTACATGA GCCAGTCCGA CAAGGGCGAA CTGGTGATCG GCGGCGGCAC CGACAGTTTC
AACAACTTCA CCCAGCGCGG CAGCTTCCAC CACATCGAGG AGACGCTGCG CGCGCTGGTG
GAGACCTTCC CGATCATCAG CCGCCTCAAG ATGCTGCGGC AGTGGGGGGG GATCGTGGAC
ATGACCGGCG ACCGCTCGCC GATCATCTCT AAGACACCGC TGGGCAACTG CTTCATCAAC
TGCGGCTGGG GCACGGGGGG CTTCAAGGCC ATCCCGGGCT CGGGCTGGGC GATGGCGGAA
CTGGTGGCCA AGGGCGAACC GGGGCCGCTT GCCGCGGAAT TCGGCATGGA CCGCTTCCGC
GCGGGCCGTT TCATCGACGA ATCGGTCGCA GCCGGGGTCG CGCATTGA
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| Protein sequence | MKRYSVFAIA REAMRHHTGW ERAWASPEPR PSYDVIVIGA GGHGLATAYY LGKNFGITNV
AVIEKGWLGG GNTGRNTTII RSNYLQDPSA AIYEKARSLY ETLSQDLNYN VMFSPRGLLM
LAQTHHEVRG YMRTVHANLL QGVETEWIGP DQVKRLVPIM NIHGPRYPVL GALLQKRGGT
ARHDAVAWGY ARACSAMGMH IIQQCEVTGV RAEGGVVSGV ETTKGFIGTK KLAIVVAGHS
GQVADMAGFR LPVEAVALQA LVSEPVKPCI DVVVMANTVH GYMSQSDKGE LVIGGGTDSF
NNFTQRGSFH HIEETLRALV ETFPIISRLK MLRQWGGIVD MTGDRSPIIS KTPLGNCFIN
CGWGTGGFKA IPGSGWAMAE LVAKGEPGPL AAEFGMDRFR AGRFIDESVA AGVAH
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