| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1874 |
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| Symbol | |
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| ID | 5084299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1923262 |
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| End bp | 1926243 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640483435 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_001168070 |
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| Protein GI | 146277911 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC GTCTGGCCCG GGGCGGGCGG CTGATCGACC GCAATCACCC TCTGGGTTTC
ACCTTCAACG GCAAGCGGAT GCGCGGCTTT GCCGGGGATA CGCTTGCGGC GGCCCTGCTG
GCCAACGACC AGATGCTGGT CGGGCGCAGC TTCAAGTATC ACCGCCCGCG CGGCATCGTG
GCGGCGGGCG CCGAAGAGCC GAACGCGCTT GTCCAGCTTG GCACCGGCGG CCGGTCGGAA
CCCAACCAGC GCACCACCAC GACCGAGCTG TTCGCGGGCC TCTCGGCCGC GAGCCAGAAC
CACTGGCCGA GCCTCGAGTT CGACGTGGGC GCGGTGAACG CGGCGGCGGG GCGCTTCCTG
CCCGCGGGCT TCTACTACAA GACCTTCCTT CAGCCCCGGC TGGCGTGGAA GCACCTGTTC
GAGCCGGTGA TCCGCCGCTC GGCGGGCCTC GGGCGGCCGC CGGAAGAGCC CGATGCCGAC
CGTTACGAGC AGGCCTACGC CTTCTGCGAC CTCCTCGTGG TGGGCGGCGG CATCGCGGGG
TTGCAGGCGG CGCTGAGTGC CTCGGCCTCG GGGCAAAAGG TGATGCTGCT CGAGCAGACG
CCGCACTGGG GCGGGCGCGC CCCGGTCGAT GACGTGCTGA TCGAGGGCCG GCCGGTGGCG
GACTGGGTGG CGGCCACGGT GGCTTCGCTC GAGGCCGCGC CGAACGTCAC GCTGCGCACC
CGCTGCATGG CGGCCGGGGT GCACGACCAC GGCTATGTGC TGGCCGAAGA GCGGGTGGCC
GATCATACGC CGGGCGACGG GCGGCCGAAG AAGCGGCTCT GGCGCATCCG CGCGGGCAAG
GTGGTGACGG CGACGGGCGC CATCGAACGG CCGCTGCCCT TCGCGGGCAA CGACATTCCG
GGCGTGATGC TCGCCTCGGC GGTGCGCGAC TATCTGGTGA ACTGGGCCGT CTCGCCCGGC
GACCGGGTGG TGATCGTGAC GAACAACGAC GACGCCTACC GCACCGCCAT CGCCGTCCAC
CGCGCGGGGC TGACGGTGCC GGCCGTGCTC GATGCGCGGG CCGAGGCCGA CGGCGCGCTG
CCCGAAGAGG TGCGCAGCCT CGGCATCCCG GTCCTGACCA ACCGCGCGGT GGCGAAGGTC
AAGGGCGGCA AGCGCGTGAC CGGCGTCGCC GTCTGCGCCC AGGCGGGCGA GGGGGCGGTG
CTCGACGAGT TTGCCTGCGA TGCGGTCGCC ATGTCGGGCG GCTGGTCGCC GGTCGTCCAT
CTCTGGAGCC ACTGCGGCGG CAAGCTGATC TGGGACGAGG CGCAGGCGGC CTTCCGTCCC
GATCCTGCCC GCCCGCCGAT CACCCACGAC GGCTCGGCGA TGGTGGCGGC CGCGGGTTCG
GCCAATGGTG AGCTGCTCTC GGCCGATGTG CTGGCCGATG CCATCCGCGC CGTGGGCGGC
GAGGGCCCGG CCCCCCGGGC GCAGAGCCCC GAGGAGGCTC CGACCGAGCC GGTCTGGATC
ATGCCGCAGG GGGCCACGCC CGCGCTGCGC TCGAAGATGT GGCTCGACTA CCAGAACGAC
GTGAAGGTGT CGGACGTGCA GCTTGCCGCC CGCGAGGGCT ACGAGTCGGT CGAGCATACC
AAGCGCTACA CGACGCTCGG CATGGCCACC GATCAGGGCA AGCTCAGCAA CATCAACGGG
CTTGCGGTGC TGGCGGGATC GCTCAACGCG CCGATCCCCG CGGTTGGCAC CACCACCTTC
CGCCCGCCCT ACACGCCCGT CACCTTCGGC GCGCTGGTGG GCGAGGCTCG GGGCGAGATC
TTCCAGCCGC TGCGCCGCAC GCCGATGCAC GACTGGCACG AGGCCCATGG CGCCTACTGG
GAGCCGGTGG GCCTCTGGCG TCGGCCCTAC TGCTACAGCC GTCCCGGCGA GAGCCACGGC
GACGCGGTGG CCCGCGAGGT CACCAACGCG CGCACCAAGC TCGGGCTGCT CGACGCCTCG
ACGCTGGGCA AGATCCTCGT GAAGGGGCCC GATGCGGGCC GCTTCCTCGA CATGCTCTAC
ACCAACGTCA TGTCGAGCCT GCCCGTGGGC CGCTGCCGCT ACGGCCTCAT GTGCAACGAG
AACGGCTTCC TGATGGATGA CGGGGTCGTG GCGCGGATCT CCGAGGACAG CTGGCTCTGC
CACACGACCT CGGGCGGGGC CGACCGGATC CACGCCCACA TGGAGGATTG GCTCCAGTGC
GAATGGTGGG ACTGGCAGGT CCATACCGCC AACCTGACCG AGCAGTTCGC GCAGGTGGCC
ATCGTCGGCC CCAACGCGCG CAGGCTGCTG GAAAAGCTCG GCGGGATGGA CGTCTCGAAG
GAGGCGCTGC CCTTCATGCA CTGGGCGGAA GGCACGATCG CGGGCATCCC CGCGCGCGTG
TTCCGCATCA GCTTCTCGGG TGAGCTGTCC TACGAGGTGG CGGTTCCTGC GGGGCAGGGG
CTGGCCTTCT GGCAGGCCTG CCACGAGGCG GGGGCCGAGT TCGGCGCCAT GCCCTACGGC
ACCGAGGCGC TGCATGTGAT GCGGGCCGAG AAGGGCTTCA TCATGATCGG CGACGAGACC
GACGGGACGG TGATCCCGCA GGACCTGAAC CTCGGCTGGG CCATCTCGAA GAAGAAGGCC
GACTTCATCG GCAAGCGCGG GATGGAGCGG GCCTTCCTCG CCAGCCCCGA CCGCTGGAAG
CTCGTGGGGC TCGAGACGCT CGACGGCTCG GTGCTGCCGG ATGGCGCCAT CGCGCCCGCG
CCCGGCTCGA ACGCGAATGG CCAGCGCAAC ACGCAAGGCC GCGTGACCTC GACCTACTGG
TCGCCGACGC TGAAGAAGGG GATCGCCATG GGCCTCGTCC ATCGTGGCCC CGAGCGGATG
GGCGAGGTGA TCGAGTTCCC GAAGATCTGG GGCGGCGTGG TGCAGGCGCG GATCGTGGAT
CCGGTGTTCT ACGACAAGGC GGGAGAGAAG CAGGATGTCT GA
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| Protein sequence | MSTRLARGGR LIDRNHPLGF TFNGKRMRGF AGDTLAAALL ANDQMLVGRS FKYHRPRGIV
AAGAEEPNAL VQLGTGGRSE PNQRTTTTEL FAGLSAASQN HWPSLEFDVG AVNAAAGRFL
PAGFYYKTFL QPRLAWKHLF EPVIRRSAGL GRPPEEPDAD RYEQAYAFCD LLVVGGGIAG
LQAALSASAS GQKVMLLEQT PHWGGRAPVD DVLIEGRPVA DWVAATVASL EAAPNVTLRT
RCMAAGVHDH GYVLAEERVA DHTPGDGRPK KRLWRIRAGK VVTATGAIER PLPFAGNDIP
GVMLASAVRD YLVNWAVSPG DRVVIVTNND DAYRTAIAVH RAGLTVPAVL DARAEADGAL
PEEVRSLGIP VLTNRAVAKV KGGKRVTGVA VCAQAGEGAV LDEFACDAVA MSGGWSPVVH
LWSHCGGKLI WDEAQAAFRP DPARPPITHD GSAMVAAAGS ANGELLSADV LADAIRAVGG
EGPAPRAQSP EEAPTEPVWI MPQGATPALR SKMWLDYQND VKVSDVQLAA REGYESVEHT
KRYTTLGMAT DQGKLSNING LAVLAGSLNA PIPAVGTTTF RPPYTPVTFG ALVGEARGEI
FQPLRRTPMH DWHEAHGAYW EPVGLWRRPY CYSRPGESHG DAVAREVTNA RTKLGLLDAS
TLGKILVKGP DAGRFLDMLY TNVMSSLPVG RCRYGLMCNE NGFLMDDGVV ARISEDSWLC
HTTSGGADRI HAHMEDWLQC EWWDWQVHTA NLTEQFAQVA IVGPNARRLL EKLGGMDVSK
EALPFMHWAE GTIAGIPARV FRISFSGELS YEVAVPAGQG LAFWQACHEA GAEFGAMPYG
TEALHVMRAE KGFIMIGDET DGTVIPQDLN LGWAISKKKA DFIGKRGMER AFLASPDRWK
LVGLETLDGS VLPDGAIAPA PGSNANGQRN TQGRVTSTYW SPTLKKGIAM GLVHRGPERM
GEVIEFPKIW GGVVQARIVD PVFYDKAGEK QDV
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