Gene Rsph17025_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1862 
Symbol 
ID5084287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1908360 
End bp1909559 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content69% 
IMG OID640483421 
Producthypothetical protein 
Protein accessionYP_001168058 
Protein GI146277899 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.66544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGGC GGAGGAATCA ACCTTCGACG GCCGAAGTCG ACAAGCCGAA GGGTTTTGAC 
GACTTCGAAT TGCGGCTGGG CGATATCATG CGCGGTGAGC GCGCCACGCT CGGCAAGAGC
CTGCTGGATG TTCAGCGCGA GCTCAAGATC AAGGCCACCT ACATCGCCGC CATCGAGAAC
GCGGACATCT CGGCCTTCGA GACGCAGGGG TTCGTGGCCG GCTATGTGCG TTCCTATGCG
CGCTATCTCG GGATGGACCC GGACGAGTCC TTCGCGCGCT TCTGCAAGGA AGCCAATTTC
ACCACCATGC ACGGGATGGC GATCTCGGTG TCCGGCGCGC GCCGGGATGC GCAGTCGCGG
ACCCGCGCGG GTGGGGAGGT GCGCGATCCG CTGGCCGACC CGAACGCGCT CTTCGTGCCG
CGGGGCGAGA GCGTCCTGGC GCGCATCGAG CCGGGCGCCG TGGGGTCGGT CTTCGTGCTG
CTCGCGCTGA TCGGCGGCAT CGGCTATGGC GGCTGGTCCG TGCTGCAACA GGTGCAGCGC
GTGCAGGTGG CCCCCGTTGA TCATGCGCCG CAGGTCGTGG CCGAGGTCGA TCCGCTGGGC
AGCGTGAGCA CGGTCGCGCC GCTGGTGCGG AGCGAGCCTG TGACGGATCT CGCCTCGGCC
GATCCGGTGC AGCCCGACCT GATGGGCCGG CTCTATCGCC CGCAGGCGCA GGCGCTCGAC
GTGCCCGTGC TGGTGTCGCG GGATGGTCCG ATCGCCGCGA TCAATCCGCG GATGAGCGAC
AATGTGCAGC GGGCCTCGCT CGAGGTGGCG CCCGAGCCGG TTGCGGCCGC TCCGGTCGAG
GAAGAGGTGC AGGTTGCCGA AGCGGCTCCG CCGACGGTGG AGCTTCTGGC CGTGCGGCCC
TCCTGGGTGC GGGTGCAGGC CGCGGATGGC ACTGTCCTGT TCGAGAAGAT CCTCGACGCT
GGCGAGCGGT TCGTCGTGCC GCAGATGGAG CAGCCGCCGG TCCTGCGGGC CGGAAACTCG
GGCTCTCTCT ACTTTGCCGT GAACGGCAAG ACCTACGGTC CGTCGGCTCC GGGGGCGCAG
GTCGTCAAGA ATGTGGCGCT GTCGGCCGAG GCGCTGGTCG GCAAATATGC CATGGCCGAC
CTGACCGGGG ACGCGGATCT GGCCCGTTAC GCCACCGTCG CCCAGAACGA GACCCGCTGA
 
Protein sequence
MIWRRNQPST AEVDKPKGFD DFELRLGDIM RGERATLGKS LLDVQRELKI KATYIAAIEN 
ADISAFETQG FVAGYVRSYA RYLGMDPDES FARFCKEANF TTMHGMAISV SGARRDAQSR
TRAGGEVRDP LADPNALFVP RGESVLARIE PGAVGSVFVL LALIGGIGYG GWSVLQQVQR
VQVAPVDHAP QVVAEVDPLG SVSTVAPLVR SEPVTDLASA DPVQPDLMGR LYRPQAQALD
VPVLVSRDGP IAAINPRMSD NVQRASLEVA PEPVAAAPVE EEVQVAEAAP PTVELLAVRP
SWVRVQAADG TVLFEKILDA GERFVVPQME QPPVLRAGNS GSLYFAVNGK TYGPSAPGAQ
VVKNVALSAE ALVGKYAMAD LTGDADLARY ATVAQNETR