Gene Rsph17025_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1855 
Symbol 
ID5084916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1898909 
End bp1899685 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID640483414 
Productintegral membrane protein-like protein 
Protein accessionYP_001168051 
Protein GI146277892 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.636824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAA GCTACTTGGA ACCCGCTTCG GCGGTCCCGG AGGTGCGTGT GCTCACCCCC 
GAAGATCTGC GGACTGCGCT CTTTGCCGGG ATGCGGGACT TCCGCCGCGC CCCGGCCTTT
GGCCTGTTCT TCTCGGCCGT CTATGTGATC TGCGGCTGGA TCATCCTCAT CGCCCTCACG
ACGAGCGGCA ACTTCTGGTG GATTTTGCCT GCGGCCGCGG GCTTTCCGAT CCTTGGCCCG
TTCATCGCCT GCGGCCTCTA TGAGGTGAGC CGCCGGCTGG AACTTGACCT GCCGCTTCGG
TGGGGGCAGG TGCTCGGCGT GGTCGTGGCG CAGAAGGACC GCCAGATCCC CTCGATGGCG
GCCGTGGTGG TGATCTTCTT CCTGTTCTGG AACTTCCTGT CGCACATGGT CTTCGCGCTG
TTCATGGGGA TGCAGCCCAT CGTGAATATC TCGAGTTCGC TCGACAGTTT CATGACCGCA
AACGGGCTGA CCCTGCTGGC GGTCGAGATG CTGATCGGGG CCGTCTTTGC CAGCATCCTG
TTCTCGATCA CGGTGGTCAG CCTACCCCTG CTGCTCGACC GGGAGATGGA TTTCGTGACG
GCCATGATCA CGAGCGTTCA GGTGGTGCAG GCCAATCCGG TGCTGATGCT GTCCTGGGGT
GTCACCATTG GCGGCATCCT GTTCTTCGCC ATGCTGCCCG GGTTCCTGGG GCTTCTGGTG
GCGCTGCCGG TGCTGGGCCA CGCCACCTGG CATCTCTATC GGCTGGCGCT CGACTGA
 
Protein sequence
MSQSYLEPAS AVPEVRVLTP EDLRTALFAG MRDFRRAPAF GLFFSAVYVI CGWIILIALT 
TSGNFWWILP AAAGFPILGP FIACGLYEVS RRLELDLPLR WGQVLGVVVA QKDRQIPSMA
AVVVIFFLFW NFLSHMVFAL FMGMQPIVNI SSSLDSFMTA NGLTLLAVEM LIGAVFASIL
FSITVVSLPL LLDREMDFVT AMITSVQVVQ ANPVLMLSWG VTIGGILFFA MLPGFLGLLV
ALPVLGHATW HLYRLALD