Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1855 |
Symbol | |
ID | 5084916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1898909 |
End bp | 1899685 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640483414 |
Product | integral membrane protein-like protein |
Protein accession | YP_001168051 |
Protein GI | 146277892 |
COG category | [S] Function unknown |
COG ID | [COG5473] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.636824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAA GCTACTTGGA ACCCGCTTCG GCGGTCCCGG AGGTGCGTGT GCTCACCCCC GAAGATCTGC GGACTGCGCT CTTTGCCGGG ATGCGGGACT TCCGCCGCGC CCCGGCCTTT GGCCTGTTCT TCTCGGCCGT CTATGTGATC TGCGGCTGGA TCATCCTCAT CGCCCTCACG ACGAGCGGCA ACTTCTGGTG GATTTTGCCT GCGGCCGCGG GCTTTCCGAT CCTTGGCCCG TTCATCGCCT GCGGCCTCTA TGAGGTGAGC CGCCGGCTGG AACTTGACCT GCCGCTTCGG TGGGGGCAGG TGCTCGGCGT GGTCGTGGCG CAGAAGGACC GCCAGATCCC CTCGATGGCG GCCGTGGTGG TGATCTTCTT CCTGTTCTGG AACTTCCTGT CGCACATGGT CTTCGCGCTG TTCATGGGGA TGCAGCCCAT CGTGAATATC TCGAGTTCGC TCGACAGTTT CATGACCGCA AACGGGCTGA CCCTGCTGGC GGTCGAGATG CTGATCGGGG CCGTCTTTGC CAGCATCCTG TTCTCGATCA CGGTGGTCAG CCTACCCCTG CTGCTCGACC GGGAGATGGA TTTCGTGACG GCCATGATCA CGAGCGTTCA GGTGGTGCAG GCCAATCCGG TGCTGATGCT GTCCTGGGGT GTCACCATTG GCGGCATCCT GTTCTTCGCC ATGCTGCCCG GGTTCCTGGG GCTTCTGGTG GCGCTGCCGG TGCTGGGCCA CGCCACCTGG CATCTCTATC GGCTGGCGCT CGACTGA
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Protein sequence | MSQSYLEPAS AVPEVRVLTP EDLRTALFAG MRDFRRAPAF GLFFSAVYVI CGWIILIALT TSGNFWWILP AAAGFPILGP FIACGLYEVS RRLELDLPLR WGQVLGVVVA QKDRQIPSMA AVVVIFFLFW NFLSHMVFAL FMGMQPIVNI SSSLDSFMTA NGLTLLAVEM LIGAVFASIL FSITVVSLPL LLDREMDFVT AMITSVQVVQ ANPVLMLSWG VTIGGILFFA MLPGFLGLLV ALPVLGHATW HLYRLALD
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