Gene Rsph17025_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1852 
Symbol 
ID5084913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1896173 
End bp1896634 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID640483411 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001168048 
Protein GI146277889 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.599333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG CAGGCCAGCC CGCCCCCGAT TTCACCCTGC CGCGCGATGG CGGCAGCACC 
GTCTCTCTCT CGGCCCTGAA GCCGGGCACG GCGGTCGTCT ATTTCTACCC CAAGGATGAC
ACGTCCGGCT GCACGCTCGA GGCGCAGGAG TTCACCGCCC TCGCCGCCCA GTTCGCCGAG
ATCGGCGCGA CCGTGATCGG CATCTCGAAG GACAGCGTCA AGTCGCACGA CCGGTTCTGC
GCCAAGCACG GGCTGGGAAT CATCCTCGCC TCGGACGAGG GCGCCTCCAC CGCCGAGGAC
TACGGCGTGT GGAAGGAGAA GAACATGTAC GGCAAGACCT ACATGGGGAT CGAGCGTTCG
ACCTTCCTGA TCGACGGCGA GGGCCGGATC GCCCGCGTCT GGCGCAAGGT CTCGGCCCGC
GGCCATGCGG CCGAGGTGCT GGCCGCCGCA CGCGAACTCT GA
 
Protein sequence
MIDAGQPAPD FTLPRDGGST VSLSALKPGT AVVYFYPKDD TSGCTLEAQE FTALAAQFAE 
IGATVIGISK DSVKSHDRFC AKHGLGIILA SDEGASTAED YGVWKEKNMY GKTYMGIERS
TFLIDGEGRI ARVWRKVSAR GHAAEVLAAA REL