Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1849 |
Symbol | |
ID | 5084910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1890321 |
End bp | 1891577 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640483408 |
Product | major facilitator transporter |
Protein accession | YP_001168045 |
Protein GI | 146277886 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.513333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGG TCCTTGCCGC CACCTGGCCG CTTCTGCTGG GCGTCATGCT GCTGATGGTC GGCAACGGGG TCCAGGCCTC GCTGCTGGGC ATCCGCGGCG CGATCGAGGG ATTCTCGACC ACACAGCTGG CCGTCGTGAC CTCGGCCTAC TTCGCGGGAT TCCTCGTGGG CTCGCAGGTC GTGCCCGACC TGATCCGCCG GGTGGGCCAT GTGCGGGTCT TTGCGGCGCT CGGGTCGATG ATCTCGGCGG TGCTGGTGGT CTATCCGGTG ATGCCCGATT GGGCGGTCTG GACGCTGCTG CGGGTGCTGA TCGGTTTCAG CTTCTCGGGC GTCTACATCA CCGCCGAGAG CTGGCTGAAC AACACCGCGA CGAACGAGAC GCGGGGACAG GCGATGTCGG CCTACATGAT GGTGCAGATG GTGGGCATCA TCACGAGTCA GGCGCTGCTG AACGCGGCCG ATCCGTCGGG CTTCACCCTC TTCGTGATCC CCTCGGTGCT CGTGTCGCTG GCCTTCATGC CGATCCTTCT GACCGTGACG CCCACGCCGA CCTTCGAGAG CACCCGGAGG CTCTCGGTGC GCGAGCTGTT TCGCGTGTCG CCGCTGGGCA TCGTGGGGAT GCTGATGACC GGCGGGATCT TCTCGGCCAT GTTCGGCATG GCCTCGGTCT GGGGCACGCT CGAGGGACTC TCGGTGCAGG AGATCTCGAT CTTCATCGGC TCGATCTATG TCGGAGGCCT CGTGCTGCAA TATCCGATCG GCTGGGCCTC GGACCGGATG GACCGGCGTC AGCTGATCCT CGGGCTTGCC GTGGTGGCGG GGCTGCTGAT GGGGGTGACC GTCCTGTTCC AGCCGCCCTT CTGGGGGCTG ATCGCGGTCG CGCTGCTGCT CGGCGGGATC ACCAACCCCG TCTATTCGCT GCTGATCGCC TATACCAACG ATTTCCTCGG CAAGGAGGAC ATGGCGGCCG CCTCGGCGGG GCTCTTGTTC ATGAACGGGC TGGGGGCGGT CTGCGGGCCG CTCGTGACGG GCTGGATCAT GGAACAGGCG GGGCCGCGCG GCTTCTTTCT CTTCATCGGC CTGCTTTACG GGGCGATGGC GATCTATGCG GGCTGGCGGA TGACGCGGCG TGCGGCGCCC GCGGTGGCCG ACACGGGCTC CTTTGCATCC GTCGCGCCGA CCGCCTCGTC GGTGGCCGTC GGCGCCGTCA TGGAAGTGGT CACCGAGGCG CAGGAGGCGC AGCAGGCGGC CGAGTGA
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Protein sequence | MFKVLAATWP LLLGVMLLMV GNGVQASLLG IRGAIEGFST TQLAVVTSAY FAGFLVGSQV VPDLIRRVGH VRVFAALGSM ISAVLVVYPV MPDWAVWTLL RVLIGFSFSG VYITAESWLN NTATNETRGQ AMSAYMMVQM VGIITSQALL NAADPSGFTL FVIPSVLVSL AFMPILLTVT PTPTFESTRR LSVRELFRVS PLGIVGMLMT GGIFSAMFGM ASVWGTLEGL SVQEISIFIG SIYVGGLVLQ YPIGWASDRM DRRQLILGLA VVAGLLMGVT VLFQPPFWGL IAVALLLGGI TNPVYSLLIA YTNDFLGKED MAAASAGLLF MNGLGAVCGP LVTGWIMEQA GPRGFFLFIG LLYGAMAIYA GWRMTRRAAP AVADTGSFAS VAPTASSVAV GAVMEVVTEA QEAQQAAE
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