| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1785 |
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| Symbol | |
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| ID | 5083012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1830657 |
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| End bp | 1832831 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640483345 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001167983 |
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| Protein GI | 146277824 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.649993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT TGACCCCCCA CACTGGACGA GAATGGGGAT CAGGCGTGAC GGACAGGGAT
GGCGAGGGCG GCCGCAAGCG GGCCGCCCGT GCCTTGCGCG CTCCGAGGGG ACCGGAGGCC
GAGGTCAAGC GGCCGACAGT GGCGGATGCA AAGGAACAGA GGCGCGCTCC GGTGCAGAGG
GGCTCGGCTG CGCCGAGCCG TGCCGGCGCG GACGATCGGC TCATGCTGCT GGCAAATGCG
CGCCTGGCCA TCGAGGGCGT GAACCTCGAG ATCGACGGCG GGCGTTTTCC GGCGAAGGTG
GTGGCGGGTC GGCCGGTGGC GGTCGAGGCT GACATCTTCT GCGATGGCCA TGACAGCATC
GACGCGGCGG TCCTGCACCG GCGGCGCGGG GCCGACGACT GGGCCGAGGT GCCGATGGAG
TTTCTCGCGA ACGATCGCTG GCGCGCGCGT GTCACCTTTC CCGAGAATGA CGCGCACGAG
CTGACGTTCC TCGCGTGGCG CGACCTCTTC ACGACCTGGC GGAAGGAAGT GGCCAAGAAG
CTCGCCGCCG GCCAAAACAT CGGGCTGGAG CTGGAGGAGG GCCGGCAGCT GTTGCAGGCG
GTCGAGGAGG GCGATCCCGA GGATCGCGCG CTGATCGACC GGACCCTGGC CGAAGATGAC
GAGGCCGAGG AGCAGGGTCA CCGCTTTGCC CGTCTGAACG CGCCGGAGGT GGCCGCGGCG
GTGCGCCGCT CCGGCCCGCG CACGAACCTG ACCTGCTACA AGATCCTGCC GGTTTTTGCC
GACCGCGAGG CTGCGGCCTT CTCGGCCTGG TACGAGATGA TGCCGCGCTC GCAGTCCGGC
GACCCCGAGC GGCACGGCAC GTTCGATGAC GTGATCCGCA AGCTCGCCTA CGTGCGGGAT
CTGGGCTTCG ACGTGCTCTA TTTCACGCCG ATCCATCCGA TCGGGCGGGT CAACCGCAAG
GGGCGCAACA ATTCCCTTAC GCCCGAGCCC AACGATCCCG GCTCGCCCTA CGCCATCGGG
GCGGACGAGG GCGGGCATGA TGCAATCCAT CCCGAACTCG GCGATTTCGA GAGCTTTGCG
CGGCTGGTCG AGGCGGCGCG CGCGCATGAT CTCGAGATTG CGCTGGATTT CGCAATCCAG
TGCGCGCCGG ATCATCCCTG GATCCGGGAA CATCCCGAGT GGTTCGACTG GCGACCCGAC
GGGACAATCA AGTTTGCCGA GAATCCGCCG AAGAAATACG AGGACATCGT CAACGTCCAC
TTCTACCGCG GCGCCATCCC GGACCTCTGG CATGCGTTGC GCGATGTGGT TCTGTTCTGG
GTGGGCAAGG GGGTCAAGAT CTTCCGGGTG GACAATCCAC ACACCAAGCC CTTTCCGTTC
TGGGAGTGGA TGATCGAGGA GGTGCGCGCC GAGCATCCCG ACGTCATCTT CCTCGCCGAG
GCCTTCACGC GGCCGAAGGT GATGAAGCGG CTGGCCAAGG TCGGCTACTC GCAGAGCTAC
TCCTACTTCA CCTGGCGCAA CACCAAGGCG GAGCTGATCG AGTATCTGAC CGAACTCACG
ACCGGGGAAT GCCGGCACTA CATGCGGCCG AACTTCTTCG CCAACACGCC GGACATCAAT
CCGGTCTATC TCCAGCATTC GGGGCGGCCG GGGTTCCGGG TGCGGCTGGC GCTCGCGGCG
ACGCTCGGCG GCAATTACGG CATCTACAAC GGCTACGAGA TCTGCGAGGC GACGCCGGTG
CCGGGCAAGG AGGAATATTT CAACTCCGAG AAATACCAGC TCCGGGCGTG GGACTTCGAC
CAGCCGGGCC ACATCCAGGA TGACATCCGG CTGATGAACC ATATCCGCCG GACCCATCCC
GCGATGCGCG ACTTCACGCG GCTGCGCTTC TACGATGCCC ACAACGACGC GGTGCTCGCC
TATGGCAAGA GCACCGAGGA CCGATCGGAC TTCCTGTTGT TCCACGTCAA TCTCGATCCG
CACCATGCCC AGACCTTCCA GTTCGAGGTC CCCTTGTGGG AGTTCGGGCT GCCCGATGAC
GCCTCGGTCG AGGTCGAGGA TCTGCTGAAC GGAAACCGCT TCACCTGGCA CGGCAAGTGG
CAGGGGCTGG AGCTTGACCC CCAGACGCGC CCCTACGCGA TCTGGCGGCT CTACGCGCCG
GGAATGCCCA GATGA
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| Protein sequence | MRLLTPHTGR EWGSGVTDRD GEGGRKRAAR ALRAPRGPEA EVKRPTVADA KEQRRAPVQR
GSAAPSRAGA DDRLMLLANA RLAIEGVNLE IDGGRFPAKV VAGRPVAVEA DIFCDGHDSI
DAAVLHRRRG ADDWAEVPME FLANDRWRAR VTFPENDAHE LTFLAWRDLF TTWRKEVAKK
LAAGQNIGLE LEEGRQLLQA VEEGDPEDRA LIDRTLAEDD EAEEQGHRFA RLNAPEVAAA
VRRSGPRTNL TCYKILPVFA DREAAAFSAW YEMMPRSQSG DPERHGTFDD VIRKLAYVRD
LGFDVLYFTP IHPIGRVNRK GRNNSLTPEP NDPGSPYAIG ADEGGHDAIH PELGDFESFA
RLVEAARAHD LEIALDFAIQ CAPDHPWIRE HPEWFDWRPD GTIKFAENPP KKYEDIVNVH
FYRGAIPDLW HALRDVVLFW VGKGVKIFRV DNPHTKPFPF WEWMIEEVRA EHPDVIFLAE
AFTRPKVMKR LAKVGYSQSY SYFTWRNTKA ELIEYLTELT TGECRHYMRP NFFANTPDIN
PVYLQHSGRP GFRVRLALAA TLGGNYGIYN GYEICEATPV PGKEEYFNSE KYQLRAWDFD
QPGHIQDDIR LMNHIRRTHP AMRDFTRLRF YDAHNDAVLA YGKSTEDRSD FLLFHVNLDP
HHAQTFQFEV PLWEFGLPDD ASVEVEDLLN GNRFTWHGKW QGLELDPQTR PYAIWRLYAP
GMPR
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