| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1782 |
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| Symbol | |
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| ID | 5083688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1823106 |
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| End bp | 1825172 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483342 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001167980 |
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| Protein GI | 146277821 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTG CGCTCCGCGA GGGCAGTCCG TTCCCGCTCG GGGCCACCTG GGACGGGTCG
GGCACCAATT TCGCGATCTT CTCGGCGAAT GCGAGCAAGG TCGAACTCTG CCTCTTCGAC
GCGCGCGGGC GCCGCGAGAT CGCCCGCGTG GCCCTGCCGG AATATACGCA CGAGGTCTGG
CACGGCTACC TGCCCGAGGT GCGGCCCGGG CAGCTTTATG GCTATCGCGT GCATGGCCCC
TACGAGCCGC ACAACGGCCT GCGCTTCAAC CCCAACAAGC TGCTGATCGA CCCCTATGCG
CTGATGCTGC AGGGCGAGAT CGTCTGGCAT GACGCGGTCT TCGGCTACCG GATGGGCAAT
GCCCGCGCCG ACCTGTCGTT CGACCGGCGG GACTCGGCCT TCGTGATGCC GAAATGCGTG
GTGGTCGATC CCGCGGTGAC ATGGGGGCCG GACTATCCCC CGCGGACCCC TTGGGCCGAG
ACGATCATCT ACGAGGCGCA TGTGAAGGGG ATGACGGCGC TCAACCCCGA GATCCCGGAC
CGGGTGCGCG GCAGCTTTGC CGCGCTCGCC GATCCGCGCG CCATCGACCA TCTGGTGACG
CTCGGGGTGA CGGCGGTCGA GCTGATGCCG ACGCAGGCCT TCTTCGACGA CCGCTACCTG
ATCGAGAAGG GGCTCACGAA CTACTGGGGC TACAACACGA TCGGCTTCTT CGCCCCCGCC
ACCCGCTACA TCTCGCCCGG TGGCGGCGTG CATGAATTCA AGCTGATGGT GCGCCGGCTG
CACGAGGCCG GGATCGAGGT GATCCTCGAT GTGGTCTACA ACCACACGGC CGAGGGCAAC
CATCTGGGCC CCACGCTCTC CTTCAAGGGC ATCGACAACG CCAGCTACTA CATGCTTGGC
GACGATCCCC GCTATTACTA CGACACGACC GGCTGCGGGA ACACGGTGAA CCTCGGGCAC
CAGCGGGTGC TGCAGCTGGT GATGGACAGC TTGCGCTACT GGGTCGAGGC CTGCCACGTC
GATGGCTTCC GCTTCGATCT CGCGACCTCG CTCGGGCGCG ACCGTCAGGG GTTCAACGCG
AACGCGGTCT TTCTCGATGC CGTGCGGCAG GACCCGGTGC TGGGCCGGGT CAAGCTGATC
GCCGAGCCTT GGGATACGGG CCATGTCGGC TACCAGCTTG GCAATTTCCC CCCGGGCTGG
GCCGAGTGGA ACGACCAGTA CCGCGACACC GTGCGCTCCT ACTGGAAGGG CGACGAGGGC
GAGCTGCCGG GGCTGGCCTC GCATCTGCTG GGGACGGCGG GCCTCTTCGA CCGGCGGGGC
AGGCGGCCCT GGGCCAGCAT CAATTTCGTG ACCGCGCATG ACGGCTTCAC CCTGTCCGAC
ACGGTCTCCT ACAACGACAA GCACAATGCG ACGAACCAGG AGGAGAACCG CGACGGCCAT
TCCGACAATC GCAGCTGGAA CTGCGGGGAG GAGGGGCCCT CCGAGGACGA GGAGGTGCTC
GATCTTCGCG ACCGGATGCG CCGGGCGATG ATGGGCACGC TCCTGATCTC GCAGGGCACG
CCCATGATCC TGATGGGCGA CGAGGTGGGC CGCAGCCAGG GCGGCAACAA CAACGCCTAT
TGCCAGGACA ACGGGATGAA CTGGCTGAAG CTCGACGACC TGTCGGCGCG GGATGCGGCC
TTTCTCGACT TCACCCGGCG GCTGATCGCG CTGCGGAAGG GCCGGCCGTT CTTCCGGCAC
CCGTCCTTCC TGCACAAGGC GGCCGTGGGG CAGCAGCCGG TCGAGGTCTG CTGGTTGCGC
CCCGACGGCG AGGAGATGAT GCCCGAGGAC TGGCACAACC CGGCCGCGCG CACCTTGGGC
CTGTTGATCC GGAACAAGCC GGCGGTGCTC GCGCTTTTCA ACAGCCACTA CGAAGAGGTG
CCGTTCACGC TGCCGCACTG CGGCGGCTGG TGGCGGATGA TCGTGGACAC GGCGACCGGA
CGGGTGCCCG AGCGGCCGGT GCCCATCCGG TCGGCGGGCT TTGCCGTGCC GCCGCGGGGA
CTGATGGTGC TGGAGGAGCA TGAATGA
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| Protein sequence | MSFALREGSP FPLGATWDGS GTNFAIFSAN ASKVELCLFD ARGRREIARV ALPEYTHEVW
HGYLPEVRPG QLYGYRVHGP YEPHNGLRFN PNKLLIDPYA LMLQGEIVWH DAVFGYRMGN
ARADLSFDRR DSAFVMPKCV VVDPAVTWGP DYPPRTPWAE TIIYEAHVKG MTALNPEIPD
RVRGSFAALA DPRAIDHLVT LGVTAVELMP TQAFFDDRYL IEKGLTNYWG YNTIGFFAPA
TRYISPGGGV HEFKLMVRRL HEAGIEVILD VVYNHTAEGN HLGPTLSFKG IDNASYYMLG
DDPRYYYDTT GCGNTVNLGH QRVLQLVMDS LRYWVEACHV DGFRFDLATS LGRDRQGFNA
NAVFLDAVRQ DPVLGRVKLI AEPWDTGHVG YQLGNFPPGW AEWNDQYRDT VRSYWKGDEG
ELPGLASHLL GTAGLFDRRG RRPWASINFV TAHDGFTLSD TVSYNDKHNA TNQEENRDGH
SDNRSWNCGE EGPSEDEEVL DLRDRMRRAM MGTLLISQGT PMILMGDEVG RSQGGNNNAY
CQDNGMNWLK LDDLSARDAA FLDFTRRLIA LRKGRPFFRH PSFLHKAAVG QQPVEVCWLR
PDGEEMMPED WHNPAARTLG LLIRNKPAVL ALFNSHYEEV PFTLPHCGGW WRMIVDTATG
RVPERPVPIR SAGFAVPPRG LMVLEEHE
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