| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1750 |
|---|
| Symbol | |
|---|
| ID | 5083656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1785521 |
|---|
| End bp | 1787233 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640483310 |
|---|
| Product | phage terminase |
|---|
| Protein accession | YP_001167948 |
|---|
| Protein GI | 146277789 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4626] Phage terminase-like protein, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCG ATGTGAGCTT CGCCTGCCCG GATTGGGCAG ACAGATTGAA GCGTGGCGAG
GTGCCGTTTC CGGCTTTGCC GCTCGACCCG GTTGCAGCGG AGGCGGCGGT CGATCTCTTC
AACCTCCTGC GAATCCCGGA TGTCACCGGG CAGCCGACGA TGGGCGAGGT CGCTGGTGAG
TGGTTCCGCG AGGTGATCCG GGCGGCTTTC GGATCGATCG ATCCCGCGAC GGGAAAGCGG
TTCGTGGGGG AGATCTTCAA CCTCATCCCG AAGAAGAACT CGAAGACGAC GAACGCTGCG
GCTTTGGGGC TGATCGCGCT CCTGATGAAT CGGCGCCCGA ACATCGACGG CGTGATCATC
GGGCCGACGC ATGAGGTTGC CCAGAAGTGC TTCGATCAGG CAGCCGGGAT GATCGAAGCC
GATCCCTACC TGCGCAAGCG GTTCAAGGTG ATCGAACACA AGAAGACGAT CCTGGACCTG
CACAAGGATG AGAGCACCGG GACGCGGATG AATGCGAAGC TGAAGATCAA GAGCTTCGAT
CCGAAGGTTG TTACCGGCTC GATCCCGGCA TTCGCCATCA TCGACGAGCT GCACCTCATG
GCGGAGATGA GCCATGCGGA GCGCGTGATC GGACAGATCC GCGGCGGCAT GATCACGAAC
GATGAGAGCC TTCTGATCAT CATCACGACC CAGTCGGAGA TTGTCCCCAC AGGCGTCTTC
AAGTCGGAAC TGGATTACGC TCGAGGCGTC AGGGACGGCC GGATCACCGC ATCCGTGCGC
ATGCTGCCGA TCCTCTACGA GTTCCCGGAA GAGGTGCAGC GCGACGAGGC GAAGCCGTGG
CGCGACCCGA AGCTGTGGCC GATGGTCCTG CCGAATCTGG GCCGGTCCGT CACGATCGAG
CGCCTGGTGC AGGACTATCA CACCGCGGTG GAGAAGGGTG CCGCCGAGGA GATCAGGTGG
GCGTCCCAAC ACCTCAACAT CGAGATCGGT CTGGGTCTCC ACGCGAACCG CTGGGTGGGC
GCAGACTACT GGCTGAAGAA CGCGGACCCC GACCTGACCT TCGAGCGCAT GCTCGAAGAA
TGCGAGGTCA TCGTATTGGG CGGCGACGTG GGTGGCGCGG ACGACCTATG CAGCCTCGCC
GCCATAGGTC GGCATCGGGA GACCAGGCTG TGGCAAGCGT GGGGCTGGGC GTGGTGCGTC
AGGGACGTCC TCGTCAGGCG CAAGGAGATC GCGCCCAGGC TTGAGGAGCT GCGGGACGCA
GGTGAGTTGC GGATCACCGC GACGGCAGAC GAGCACACAA TCGAGATGGT CGAGATCTGC
GCCCGTGTCC GCGATGCAGG TCTGATGCCG GAAAAGCTGG GGATAGGGCT CGATCCGCAT
GGCGTGGCGG CTCTGGTCGA TGCCCTGGAG GCAGAGGGTT TCGACCCGAA CGTGCACATC
ATGGCCGTTG GGCAGGGCTA CAAGCTGAAC GGCGCGGTCA AGGGGCTTGA GCGCCGCCTC
CTTGACGGGA GGCTGCGTCA CGGGGGTCAG CGCCTCATGA ACTGGGCGGT CGGCAACGCG
AAGTCGGAGC AGAAGGGCAA CAACGTGTAC ATCACGAAGC AAACTGCTGG CATCGCGAAG
ATCGATCCAC TGATCGCGTT GTTCAACGCG GCGATCCTGA TGGACATGAA CCCGACGGCT
GCTTCTGCGG CCTTCGAATA CACCGGGATG TAA
|
|---|
| Protein sequence | MPLDVSFACP DWADRLKRGE VPFPALPLDP VAAEAAVDLF NLLRIPDVTG QPTMGEVAGE
WFREVIRAAF GSIDPATGKR FVGEIFNLIP KKNSKTTNAA ALGLIALLMN RRPNIDGVII
GPTHEVAQKC FDQAAGMIEA DPYLRKRFKV IEHKKTILDL HKDESTGTRM NAKLKIKSFD
PKVVTGSIPA FAIIDELHLM AEMSHAERVI GQIRGGMITN DESLLIIITT QSEIVPTGVF
KSELDYARGV RDGRITASVR MLPILYEFPE EVQRDEAKPW RDPKLWPMVL PNLGRSVTIE
RLVQDYHTAV EKGAAEEIRW ASQHLNIEIG LGLHANRWVG ADYWLKNADP DLTFERMLEE
CEVIVLGGDV GGADDLCSLA AIGRHRETRL WQAWGWAWCV RDVLVRRKEI APRLEELRDA
GELRITATAD EHTIEMVEIC ARVRDAGLMP EKLGIGLDPH GVAALVDALE AEGFDPNVHI
MAVGQGYKLN GAVKGLERRL LDGRLRHGGQ RLMNWAVGNA KSEQKGNNVY ITKQTAGIAK
IDPLIALFNA AILMDMNPTA ASAAFEYTGM
|
|---|
| |