Gene Rsph17025_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1704 
Symbol 
ID5083436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1751097 
End bp1753733 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content69% 
IMG OID640483262 
Productcytochrome c, monohaem 
Protein accessionYP_001167902 
Protein GI146277743 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
[COG2863] Cytochrome c553 
TIGRFAM ID[TIGR02891] cytochrome c oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCT CTCATGCCAG CGACGCGCCG CTGCCCGTGG GTGCGTTCCC GCCAACCGAG 
GCGATGCTGT CCGAGCCCGT GCCCTCTGCC CTGGCCGAGG CGCAGGCCGA CCGGCTGCGC
GCCGTCTGGG CCACGCCAAT GGGCTGGCGC TACTGGTCGG CGGTGAACAA CAGCGAGGTG
GGCGTGTGGT ATGCGCTGAC GGCGCTGGCC TTCATGCTCT GCGCCGGGGT GCTTGCGGTG
CTGATGCGGG TGCAGCTGGC GGTGCCGGGC AACGACTTCC TCTCGGCCGA TCGCTTCAAC
CAGTTCTTCA CCATGCATGG CTCGGCCATG ATGTTCCTCT TTGCCGTGCC GATGTTCGAG
GCGATCTCGA TCATCCTGCT GCCCGCGCTG CTCGGCGCGC GCGACCTGCC GTTCCCGCGG
CTGTCGGCCT ACGGCTACTG GTGCTTCCTG ATCGGCGGCG TCTTCGTGAT GGGCTCGATC
CTCTTCGACG CGGCGCCGAA ATCGGGCTGG TTCATGTATC CGCCGCTGGC CACGCAGGAC
GAGGGGCTCG GCTCGGACAT CTGGCTGCTG GGGCTGTCCT TCATCGAGGT GGCCTCGATC
GCCGCCGCGG TCGAGCTGAT CGTGGGCGTG CTGAAATGCC GCCCGCCGGG GATGCGGGTC
AACCTCATGC CGCTCTATGC CTGGTATGTG CTGGTGGTGG GGGGCATGAT CCTCTTTGCC
TTCCCGCCGC TCATTGCCGG CGACCTTCTG TTCGAGATGG AGCGCGGCTT CGACTGGCCC
TTCTTCGACC CCGAGCGGGG GGGCGATCCG CTGCTCTGGC AGCACCTGTT CTGGATCTTC
GGGCACCCCG AGGTCTATAT CATCTTCCTG CCCTTGATCG CGCTGGCGGC CATGATCGTG
CCGACCGCGG CACGCCAGCC CATCGTGGGC TATTCCTGGA TCGTACTCTC GGCCGTGGGA
ACCGGCTTTC TCAGCTTTGG CCTGTGGGTG CATCACATGT TCACCACGGG GCTGCCCGCG
CTCTCGCTGG GGTTCTTCTC GGCCGCCTCC GAGGCGGTGG TGATCCCGAC CGGCATCCAG
CTCTTTGCCT TCGTGGCGAC GCTGATGGTG GGCCGCGTCA AGATGATCCT GCCGATGCTC
TGGATCGCGG GCGGGCTTGC CGTCTTCACG GCCGGCGGGC TCACCGGCGT CATGGTGGCC
ATCGCCCCCT TCGACTGGCA GGTGCACGAC ACCTATTTCA TCGTGGCCCA CCTGCATTAC
ACGCTCTTTG GCGGCATGGT CTTTCCGATC ATCGCGGGGG TCTATTACTT CTATCCCGTC
ATCACCAAGA AGGCCCTGTC CGAGCGGCTG GGGCGCTGGT CCTTCTGGCT GCTGTTCACC
GGCTTCAACG TGACCTTCCT GCCCATGCAC CTGACCGGGC TGAAGGGGAT GCCGCGGCGG
GTCTTCACCT ACCCGGGCCA TGTCGGCTGG GACTGGCTGA ACCTGATCTC GACGGTGGGC
GCCTTCGTGA TGGCGGCGGG CTTCCTTGTC TTCGTGGTGG ACCTGCTGCG CCCCAAGCGG
ACGAAGATCG CCGACCGCAA CCCGTGGGGG GCGGGGACGC TGGAATGGTC GCTCGACCTC
GAGGACGACA ACTGGGGCGT GCGCTCCATT CCCCATATCG AGACGCGCTA CCCGCTCTGG
CAGCAGCCGA AGCTGGTGGA ACGGATGGAT GCGGGCCGGT TCTACCTCCT CGGTGCGCGC
CACTACGAAT CCGCCTGCCG CGTCTGTCAT GGCGCGCCGG GGGTGCCTCA GGGGGCGACG
GTGCGCGCGA TGCTGCCCGC GCCGCCGCCC ATTGGCGACG CGGTGCGCGA CTGGCGGCCG
AACGAACTGG GCTGGATCGT CCGCGAGGGG GTGAAGATGT CGGGCATGCC CGGCCGGCCC
TCGGCCCGCA ACGACGAGGT CTGGCCGGTC GTGGCCTTCC TCACCCGAGT GCGGGGCATG
AGGCCCGAGA ACTATGCCGC CCTCGTGGGC CCGGCCACGG CAGAGGGCCC ACCGGGCTTC
GGCTCTTGCG CGGGCTGCCA CGGCATCGAC GGCCTCTCGG GCAACGAGCG GATCCCGAGG
CTGGATATCC AGACACCGGA CTATCTCGAG ATGGCCTTGC TGACCTACCG CGACGGGCGC
CGCCAGAGCG GCTACATGCG CCACGCGGCC AGCGCCGTGC CCGCCGAGAC GCTGCGCCCG
CTGGCGCAAC GGTTCGGCCG ACTGTCAGAT GCAACCGCAC GGGGGGCGGG GCAGGCCGCG
AGGGCTGCCG GCTCGGGCGC GGCAGGGGCC GCCGGGGCGT CGGACGATCC CGTCGAAGAG
GGCCGCAGGC TGGCCTTCGC CCTCGACCGC CGCCGCGACC TTCCGGCCTG TCACTCCTGT
CACGGACCGG ATGCCGAGCG GCGGCGTCCC GACACGCCCT CGCTGTCGGG CCAGTATCGC
GGCTATCTCG AGACGCAGCT CATCCTCTGG CGCGACGGAC TGCGCGGCGG CGGCCCGCGC
GCGGAGCTGA TGTCCGAGGC GGCGCGCCGA TTGAACGATA ACCAGATTGC GGCGCTCGCG
GCCTATTATT CCTCGCTGGC GCCCGAGGTG CCGGCGGCGG GCGGCGCGGC GAACTGA
 
Protein sequence
MTRSHASDAP LPVGAFPPTE AMLSEPVPSA LAEAQADRLR AVWATPMGWR YWSAVNNSEV 
GVWYALTALA FMLCAGVLAV LMRVQLAVPG NDFLSADRFN QFFTMHGSAM MFLFAVPMFE
AISIILLPAL LGARDLPFPR LSAYGYWCFL IGGVFVMGSI LFDAAPKSGW FMYPPLATQD
EGLGSDIWLL GLSFIEVASI AAAVELIVGV LKCRPPGMRV NLMPLYAWYV LVVGGMILFA
FPPLIAGDLL FEMERGFDWP FFDPERGGDP LLWQHLFWIF GHPEVYIIFL PLIALAAMIV
PTAARQPIVG YSWIVLSAVG TGFLSFGLWV HHMFTTGLPA LSLGFFSAAS EAVVIPTGIQ
LFAFVATLMV GRVKMILPML WIAGGLAVFT AGGLTGVMVA IAPFDWQVHD TYFIVAHLHY
TLFGGMVFPI IAGVYYFYPV ITKKALSERL GRWSFWLLFT GFNVTFLPMH LTGLKGMPRR
VFTYPGHVGW DWLNLISTVG AFVMAAGFLV FVVDLLRPKR TKIADRNPWG AGTLEWSLDL
EDDNWGVRSI PHIETRYPLW QQPKLVERMD AGRFYLLGAR HYESACRVCH GAPGVPQGAT
VRAMLPAPPP IGDAVRDWRP NELGWIVREG VKMSGMPGRP SARNDEVWPV VAFLTRVRGM
RPENYAALVG PATAEGPPGF GSCAGCHGID GLSGNERIPR LDIQTPDYLE MALLTYRDGR
RQSGYMRHAA SAVPAETLRP LAQRFGRLSD ATARGAGQAA RAAGSGAAGA AGASDDPVEE
GRRLAFALDR RRDLPACHSC HGPDAERRRP DTPSLSGQYR GYLETQLILW RDGLRGGGPR
AELMSEAARR LNDNQIAALA AYYSSLAPEV PAAGGAAN