Gene Rsph17025_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1690 
Symbol 
ID5083422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1735327 
End bp1735944 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID640483248 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_001167888 
Protein GI146277729 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGA CGATAGGGCG GCCCGGCGCC GAGGCGCCGG AAGACCGCAT GGCCGCATCC 
CATCTCTTCA CGCGCCTCGA CGATCTCGTG GCCTGGTCGC GCAAGCACAG CCTCTGGCCG
TTCAACTTCG GGCTGTCCTG CTGCTATGTC GAGATGGCGA CGGCGCTGAC TCCGGTCTAC
GACCAGGCCC GCTTCGGGGC GGAGGTCATC CGCTCCACCC CGCGGCAGGC CGACCTGCTG
ATCGTGTCGG GCACCGTCTT CCGCAAGATG GCCGTGCCGC TCTACCGCCT CTACCAGCAG
ATGCGGGAGC CGCGCTGGGT GATCTCGATG GGCGCCTGCG CCAATTCCGG CGGCATGTAT
GACATCTATT CCGTGGTGCA GGGCGTGGAC AGCTTCCTGC CGGTCGATGT CTATGTGCCC
GGCTGCCCGC CGCGGCCCGA GGCGCTGATG GAGGCGCTGG TGCTGCTGCA GTCCAAGATC
GCGACCGAGG CGCGCCCCCT TCAGATCCGC ATGGGCGAGA CCGGCCCCGC CCGGCCCTTC
GACCCCGTTC CGCGCCGCGA CGCGCTGCGC GAGGGGCGCA TGTCCGTCGC CCGCCTGGCC
GATCCGGAGT CCACATGA
 
Protein sequence
MSWTIGRPGA EAPEDRMAAS HLFTRLDDLV AWSRKHSLWP FNFGLSCCYV EMATALTPVY 
DQARFGAEVI RSTPRQADLL IVSGTVFRKM AVPLYRLYQQ MREPRWVISM GACANSGGMY
DIYSVVQGVD SFLPVDVYVP GCPPRPEALM EALVLLQSKI ATEARPLQIR MGETGPARPF
DPVPRRDALR EGRMSVARLA DPEST