| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1686 |
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| Symbol | |
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| ID | 5083418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1730728 |
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| End bp | 1731825 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640483244 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001167884 |
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| Protein GI | 146277725 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.846032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGTC GCTCATTCAT CACCAAGGCC GCCGTGGGGG GCGCCGTGGC CGGCAGCCTC
GCCGCGCCCG CCATCGCCCA GACCGCGCCG AAGGTCACCT GGAGGCTCAC CTCCTCCTTC
CCGAAATCGC TCGACACGAT CTTTGGCGGC GCGGAAGTGC TGTCGCAGAT GGTCAGCGAA
GCCTCGGACG GCAACTTCCA GATCCAGGTC TTCTCGGCGG GTGAGCTGGT GCCGGGCCTG
CAGGCCGCCG ACGCCGTGAC CTCGGGCACC GTCGAATGCT GCCACACGGT CGGCTACTAT
TACTGGGGCA AGGATCCGAC TTTCGCGCTG GCCGCGGCGG TGCCCTTCTC GCTCTCGGCG
CGCGGCATCA ACGCCTGGCA CTATCACGGC GGCGGGATCG ACCTCTACAA CGAGTTCCTC
GCGCAGCACA ACATCGTGGG CTTCCCGGGC GGCAACACCG GCGTGCAGAT GGGCGGCTGG
TTCCGGCGCG AGATCAACAC CGTGGCCGAC ATGCAGGGCC TGAAGATGCG GGTCGGCGGC
TTTGCCGGCA AGGTGATGGA ACGCCTCGGC GTCGTGCCGC AGCAGATCGC CGGCGGCGAC
ATCTACCCCG CGCTGGAGAA GGGCACGATC GACGCGACCG AGTGGGTCGG CCCCTATGAC
GACGAGAAGC TCGGCTTCTT CAAGGTCGCG CCCTACTACT ACTACCCCGG CTGGTGGGAA
GGTGGCCCGA CCGTCCACTT CATGTTCAAC AAGGCCGCCT TCGAGGGCCT GCCGCCCGCC
TACCAGGCGC TGCTGCGCAC CGCCTGCCAG GCGACGGATG CGAACATGCT GCAGATGTAC
GACTACAAGA ACCCGACCGC GATCAAGTCG CTCGTGGCGC AGGGCACCCA GCTGCGGCCC
TTCAGCCCCG AGATCCTGCA GGCCTGCTTC GAAGCCGCCA ACGCGGTCTA TGCCGAGATG
GAAGCCGCGA ACCCCGCCTT CAAGAAGATC TGGGATTCGA TCAAGGCCTT CCGCTCCGAG
AACTACACCT GGGCGCAGAT CGCCGAATAC AACTACGACA CCTTCATGAT GGTGCAGCAG
AACGCGGGCA AGCTCTGA
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| Protein sequence | MDRRSFITKA AVGGAVAGSL AAPAIAQTAP KVTWRLTSSF PKSLDTIFGG AEVLSQMVSE
ASDGNFQIQV FSAGELVPGL QAADAVTSGT VECCHTVGYY YWGKDPTFAL AAAVPFSLSA
RGINAWHYHG GGIDLYNEFL AQHNIVGFPG GNTGVQMGGW FRREINTVAD MQGLKMRVGG
FAGKVMERLG VVPQQIAGGD IYPALEKGTI DATEWVGPYD DEKLGFFKVA PYYYYPGWWE
GGPTVHFMFN KAAFEGLPPA YQALLRTACQ ATDANMLQMY DYKNPTAIKS LVAQGTQLRP
FSPEILQACF EAANAVYAEM EAANPAFKKI WDSIKAFRSE NYTWAQIAEY NYDTFMMVQQ
NAGKL
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