Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1678 |
Symbol | |
ID | 5083410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1722375 |
End bp | 1722875 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640483236 |
Product | hypothetical protein |
Protein accession | YP_001167876 |
Protein GI | 146277717 |
COG category | [S] Function unknown |
COG ID | [COG3685] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.108531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCTGT TTTCCAAGGA CATCCGTACG ATGGACGATC TTTACATGCA CATGCTGCAG GATATCTACT ATGCCGAGAT GCAGATCGAG AAGGCCCTGC CCAAGATGAT CGCCAAGGCC GGCGATGCGG GCCTCCGCGA GGGGTTCGAG CATCACCTGG ACGAGACGCG CGGACACGTC CAGCGGCTCG AGCGGGTCTT CTCTCTGCTC GGGCACGAGG CCAAGGGCAC GACCTGTCCG GCGATCGACG GGATCATCAA GGAAGCCAAT GATGTGGCGG GCGACATTGC CGAGCAGGAT GTGCTCGATG CGGCCCTTGC CGCCGCGGCG CAGGCGGTCG AGCATTACGA GATGACGCGC TACGGCACGC TCATCGCCTG GTCGAAGGAG CTTGGGCGCA CCGAAGTGGC GCAGATCCTC GAGCAGACGC TCGCAGAGGA AAAGGCGGCC GACATGAAGC TCACGAAGCT GGCCGAGGCC CGGCTGAACC GCGCCGCCTG A
|
Protein sequence | MALFSKDIRT MDDLYMHMLQ DIYYAEMQIE KALPKMIAKA GDAGLREGFE HHLDETRGHV QRLERVFSLL GHEAKGTTCP AIDGIIKEAN DVAGDIAEQD VLDAALAAAA QAVEHYEMTR YGTLIAWSKE LGRTEVAQIL EQTLAEEKAA DMKLTKLAEA RLNRAA
|
| |