Gene Rsph17025_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1670 
Symbol 
ID5082748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1715110 
End bp1715787 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID640483228 
Productflagellar hook capping protein 
Protein accessionYP_001167868 
Protein GI146277709 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.166978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CGACGCCGGT TGACGGCTCT TACGCCGCCG GGCTTGCGAT GAAGACGGCG 
ACGCAGGCCA AGGGCAGCTC GAACCTGGGG CAGGAGGATT TCCTCAAGCT CCTGACGACG
CAGCTTCAGA ACCAGGACCC GTTCCAGCCG ATGGAGAACG GCGAGTTCCT CGCCCAGATG
GCGCAGTTCT CGACCGTCTC GGGGATCGAG CAGCTGAACG GCACGCTCAG CGGCATCGGC
GAGGGGCTCG GTTCGTTCCG CACCGCCACC GCCGCGTCGC TGATCGGGCG CAGCGTGCTG
GTCCCCGGCA CGCTGGCGCG CGCGGACGAG GCGGGCGGCG TCCATGGCGC GGCGACGCTC
ACCGATCCGG CCGAAGCGGT TGTCGTCACC TATTCCCACA GCGTCACCGG CCAGCTTCTG
CACAGCCAGA CCCTCGGGCC GCAGAAGGCG GGGCAGGTGA ACTTTGGCTG GGACGAAGTG
CCCGCCTCGC TCGTCTCGTC GCGCGTGCCG CTGCGCGTCA GTGTCTCGGC CGCCAATGCC
GATGGCTCCG TGCCGCTCGC GCCCTCGGTC TATGCCCGTG TCCTGTCGGT CGGTTCCACG
ACCGATGGTC GGGGCACGCT GCTCGAGGTC GAGGACCAGG GCCGCGTCCC CGCCGAGTCC
GTCACGTCCT TCCGCTGA
 
Protein sequence
MTTTTPVDGS YAAGLAMKTA TQAKGSSNLG QEDFLKLLTT QLQNQDPFQP MENGEFLAQM 
AQFSTVSGIE QLNGTLSGIG EGLGSFRTAT AASLIGRSVL VPGTLARADE AGGVHGAATL
TDPAEAVVVT YSHSVTGQLL HSQTLGPQKA GQVNFGWDEV PASLVSSRVP LRVSVSAANA
DGSVPLAPSV YARVLSVGST TDGRGTLLEV EDQGRVPAES VTSFR