Gene Rsph17025_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1666 
Symbol 
ID5082744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1711531 
End bp1712199 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID640483224 
Productflagellar L-ring protein 
Protein accessionYP_001167864 
Protein GI146277705 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.288217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCC GCATGTCCCT GTCCGCGCTG GCCCTGCTGC TCGCGCCCGC CGCCTGCTCG 
ACCTATGTCG AGGACCGCGC CTCCGAAGCC TGGGCGCCCG TCTATCCGGT CGAGGAGCCC
GCGCGCCTCG ACAGCCTGCC CACCGGCGGG ATCTACAGCG CCAGCGCCCG CGGCCTCTTC
GTGTCGGACC GGCGCGCGGC GCGGGTGGGC GACATCGTGA CCATCGACTT CGCCGAGAAG
TTCTCGGCCT CCAAGTCGCA GACCGCCACC GGGTCGCGCA GCAACGACTA TGCGCTCGAC
CTGCCGGACG CGCTCACGCT CGGGCTGGAC GACGGGGCGC TCGACAATTC CACCAGCCAG
AGCTTTGCCG GGCGGGGCGC CGCGTCCCAG TCCAACTCGC TGCGCGGGCG GATGTCGGTG
TCGGTGACGC GCGTGCTGCC GGGCGGCAAC CTCGAGATCA TGGGCCAGAA GCTGCTCACG
CTGAACAACG GCAACGAATA TGTCCGGCTG AAGGGCGTGG TCCGTCCCGA GGATATCGGC
CCCGACAACG TGGTCAGCTC GGACCGGATC GCGCACGCCG AGATCAAGTA TGTCGGCGCG
GGCGACACCG CCGACACGGC CAAGCCCGGC TGGCTGCGGC GCGGCCTTTC CGTGGTTTCG
CCGCTGTGA
 
Protein sequence
MSRRMSLSAL ALLLAPAACS TYVEDRASEA WAPVYPVEEP ARLDSLPTGG IYSASARGLF 
VSDRRAARVG DIVTIDFAEK FSASKSQTAT GSRSNDYALD LPDALTLGLD DGALDNSTSQ
SFAGRGAASQ SNSLRGRMSV SVTRVLPGGN LEIMGQKLLT LNNGNEYVRL KGVVRPEDIG
PDNVVSSDRI AHAEIKYVGA GDTADTAKPG WLRRGLSVVS PL