| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1660 |
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| Symbol | |
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| ID | 5082738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1702641 |
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| End bp | 1703741 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640483218 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001167858 |
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| Protein GI | 146277699 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.798759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTC ACTTCTCGCT TGATACGATC CGCTCGCGGC CTCTGCCTCC TCCGGAAGGG
TTGGTTGACA GGGTGATCCC CGGCGAGTCC GTCGCGATCC GCCGGGTCAA GCAGCTGATC
GGAGCCGTCG CGATCAGCGA AGCGCCGGTT CTTGTGCGGG GCGCGACCGG GACGGGCAAG
GAACTGGTGG CCGAGGCCCT GCACCGCGCG TCGGGCCGGG GCGGCAACCT TGTCGCCGTG
AACTGCGCGG CCATCCCGGC CGAGTTGCTC GAATCCGAGC TGTTCGGCCA TGAGAAGGGC
GCCTTCACCG GAGCCGAACG GCAGCGGATC GGCCGGATCG AGATGGCCCA CGGCGGCACG
CTCTTTCTCG ACGAGATCGG CGACATGCCG CTCGCGCTTC AGGCCAAGCT GCTGCGCGTG
CTTGAGAGCC GCCGGATCTC GCGCGTCGGG GGCACGGGCG AGATCGACGT GGATTTCCGT
CTGGTGACGG CCACGCACCG CAATCTCGAT GCGCAGGTGG CCAAGGGCGG GTTCCGCAGC
GACCTTTACT ACCGGATCAA CGTGTTCCCG CTCGAGCTGC CCGACCTGCG CGAGCGCACC
TCGGACATCC CCCTGATCCT GGCCCGGATG CTCGACGATC ATCTGGCGCG CAATCCCGCG
GCCGATCTGC CGCATTTCGA TGCCGGCGCA CTCCGGGCTC TGGGCGCGCA TGACTGGCCG
GGCAATGTGC GCGAGCTGCG CAACGTGCTG GCGCGGGCTC TTGTGCTCTT TCCGGGCCGC
ATGGTCTCGG CGCGCCATGT GCGCGAGAAC CTCCTGCAGC TGGCCATGCC CGAGCCCGAG
GGCCAGTCCG AACTGCCCCC GGCCGCGTTG CCCGCGGCGC AGGGCCTGCC GGAGCCGGGC
CAGTTCGGGG GCATGCTGGA GGGGCGCACC GATCTCGACC TGCGGGGCTA TCTCCGCGAC
ATCGAGGTGG CGCTGATCGA GGCCGCGCTG GCACAGCACG ACGGCTGCGT CAGCCGCGCG
GCCGATGCGC TGCGCCTCCG CCGCACGACG CTCATCGAGA AGATGAAGAA GTTCGGCATC
ATGCGCGGGG TCGAGGCCTG A
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| Protein sequence | MTSHFSLDTI RSRPLPPPEG LVDRVIPGES VAIRRVKQLI GAVAISEAPV LVRGATGTGK
ELVAEALHRA SGRGGNLVAV NCAAIPAELL ESELFGHEKG AFTGAERQRI GRIEMAHGGT
LFLDEIGDMP LALQAKLLRV LESRRISRVG GTGEIDVDFR LVTATHRNLD AQVAKGGFRS
DLYYRINVFP LELPDLRERT SDIPLILARM LDDHLARNPA ADLPHFDAGA LRALGAHDWP
GNVRELRNVL ARALVLFPGR MVSARHVREN LLQLAMPEPE GQSELPPAAL PAAQGLPEPG
QFGGMLEGRT DLDLRGYLRD IEVALIEAAL AQHDGCVSRA ADALRLRRTT LIEKMKKFGI
MRGVEA
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