Gene Rsph17025_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1642 
Symbol 
ID5082720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1685671 
End bp1686690 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID640483200 
Productflagellar motor switch protein FliG 
Protein accessionYP_001167840 
Protein GI146277681 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.049908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAG CCGCCGATCA CTTCAAGACG CTCTCGGGAA CGCAGAAGGC CGCGATCCTG 
CTCATGCTCT TCGGCGAGAC CACCGCCGCG CAGATCATGC GCAACCTCTC GCCGCGCGAG
GTGCAGCATC TCGGCGCCGC CATGTACACG GTCCGCGGGG TGGATCAGGA CACGCTGAGC
CTCGTGCTCG ACGATTTCCT CGAGACGCTC CGGCTGCAAA CGGGCCTGGG CTTCGGCGCG
GCGGGCTATA TCCGCAACGT CCTGTCGGCG GCTTTCGGAG AGGACAAGGC CGAGACGGTC
ATCAGCCGCA TCGGCCAGTC CGCCTCCGAG CGTCCGCTCG AGATCCTCGA CTGGATGGAT
GCGCCCTCGA TCGCCGAGCT GCTGGTGGAC GAGCATCCGC AGATCATGGC GCTGACGGTG
GCCTGCCTCG ATCACGCGCT GGCCGCCCAG GTGCTGGCCC TCCTGCCCGA GGAGATCCAG
CCCGAGGTCG TCCAGCGCAT CGCCTCGCTC AACACGGTGC AGCCGGAGGC GCTGGCCGAT
CTCCAGCAGG TCATGCAGCG CAAGTTCAAG GCCTCCACCA CGATGCGCGC GAGCCAGATC
GGCGGCGTGA AGGCCGCGGC CAAGATCATG AACTTCACCC GCACGGCGAC CGAGGCCCGG
ATCCTCAAGG ACATCCGCAA GGACGACAAG GATCTGATGC AGGCGATCCA GGACAACATG
TTCGTCTTCG ACAACCTCAT CAAGTCCGAC GAACGCTCGC TTCAGACGCT GATGCGGTCG
GTGGACAACG AGACGCTGGT GCTGGCGCTG AAGGGCGCGG ACGAGATGCT GCGGGCCAAG
ATCCTCGGCT GCATGTCCAC CCGCGCGGCG GCCAATGTGC GCGACGAGAT GGAGGCGATG
GGGCCGGTGC GGCTGACGGA CGTCCAGGCC GCGCAAAAGC AGATCATCGC GGTGGCGCGG
CAGCTGTCGG ACGAGGGCAC GATCGTGCTC GCGGGGCGCG GCGGCGAGCA GATGGTGTAA
 
Protein sequence
MSKAADHFKT LSGTQKAAIL LMLFGETTAA QIMRNLSPRE VQHLGAAMYT VRGVDQDTLS 
LVLDDFLETL RLQTGLGFGA AGYIRNVLSA AFGEDKAETV ISRIGQSASE RPLEILDWMD
APSIAELLVD EHPQIMALTV ACLDHALAAQ VLALLPEEIQ PEVVQRIASL NTVQPEALAD
LQQVMQRKFK ASTTMRASQI GGVKAAAKIM NFTRTATEAR ILKDIRKDDK DLMQAIQDNM
FVFDNLIKSD ERSLQTLMRS VDNETLVLAL KGADEMLRAK ILGCMSTRAA ANVRDEMEAM
GPVRLTDVQA AQKQIIAVAR QLSDEGTIVL AGRGGEQMV