| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1641 |
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| Symbol | |
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| ID | 5082719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1683951 |
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| End bp | 1685669 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640483199 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001167839 |
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| Protein GI | 146277680 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.178622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.771793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTCT CTCCCACCCC TCCCGCGGTG CGCGGCGCCG ACAGCCCGCT GGCGCTCCAG
ATGCGCGGCA TGGTCTCGCA ACTGCGCCAG TTCGGCGACC AGCCGGGGCT GCGCCGCGCC
ATGCCCGCCA TCGTGATCCT CAGCGTCACG GTGCTGGCCC TCGCCGGCTG GATCCTGATG
CGCGAGCCCT CGCGGGTCAC GCTTTATCCC GGCCTGCCCG AAGCCGAGAA GGCCCGCGTG
ATCGACACGC TGACGGGGGG CGGCATCGCG GCCGTCATCG ACGAGCGCAC CGGCGAGGTG
GCCGTGCCCG GCGGCGACTA CCACCGCGCG CGGATGCTGC TGGCCGCGCA GGGGCTGCCG
CAGGGCCTGC CCGACGGCAA CGCCATGCTG AGCGACCTGC CGATGGGCAC CTCGAAATCG
GTCGAGACCG CGCGGCTGCG GCAGGCGCAG GAACTCGACC TTGCGCGCTC CATCACCGAG
ATCTCGGCGG TGTCGGCGGC ACGGGTGCAT CTGGCGCTCC CCGAACGGTC GGCCTTCCTT
CGCGACAGCC AGCCGCCGCG CGCCAGCGTC TTCCTGCAGG TGGCTCCGGG GCGCGCCCTC
GACGGCGCGC AGGTCGAGGC GATCGTGAAC CTGGTCTCGT CCTCGGTGCC GGGGATGGCG
CGGCAGGATG TGACGGTGGT GGACCAGATG GGCCGCCTGC TGTCGCGCGG CTCGGACGAC
CCGGCGGTGC TGCTCAATGA CCGCCAGCTC CAGCACCGCG TCCAGATGGA GACGCTCTAC
CGCAACCGGA TCGAGAGCCT GCTGTCGCCG ATCACCGGGC CGGGCAACCT GGCCGTCCAG
GTCACGATCG ACATGGACTT CACCCGTCAG GAGATCCGCG AGGAGCAGGT CGATCCCGAC
CGGACCGCGA TCCTGTCGGA GCAGAGCCAG GTCGAGGAAA GCGCCGATCC GCAGGCCCGC
GGCATCCCGG GCGCCGTCGC CAACGCACCG CCCCCCGAGG CCGCCCTGGC CGAAGGCGCG
CCGCCCACCG AGGCGGGAGC GGCCCCGCCG GCCCTGCGGT CGCGCTCGCA GAACTCGACC
CGCAACTTCG AGATCAGCCG GAAGGTCGAG ACCACCCTGC CCGCCACCGC CCGCATCGCC
CGCGTCAGCG CCGCCGTCGT GATCCGTGCC CAGCCGCAGC CCGCCCCGGC CGACCCCGAG
GCGCCTTCGC CGCCGCTCCT GCCCGAGGCG CTGCAGGCCG ATCTCGACCG GCTGACCCGC
TCGGCCATCG GCTTCGACGA GACCCGCGGC GACGTGGTCA CGATCACCGC CCAGCCCTTC
CTCGACACGA TCATGCCCGA GCCGCCGGGC TGGACCTCGC AGCCCTGGGT GGCCGATCTG
GCCCGTCAGG CCTTCCTGCT GGCAGCCCTG GCCGTGGTGG CGCTGGGTGT CGTGCGGCCC
ATCCTGAACC GCGTCCTGCT GCCCGCCCCC GCCGCGGCCG GCGCGCTGCC GCTCTCGCCC
GGAGAGGCCG CCGTCGAGGT GGGCGAAGGC GAGACGCTGG ACGATGTGCG CGCCCGTCTC
AAGGCCCGGC AGGGCGCGCT CACGAAGAAC ATGCTCGACG CGGCGCGCAG CCACGAAGAG
CAGATCCTCG TGATCCGCAA GCTGGTCGAG GAGGACTCGG GGCGCATCGC CACGACCTTC
CGCCAGATGA TCGCCTCCGA GCTTGATACC GTGAACTGA
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| Protein sequence | MALSPTPPAV RGADSPLALQ MRGMVSQLRQ FGDQPGLRRA MPAIVILSVT VLALAGWILM
REPSRVTLYP GLPEAEKARV IDTLTGGGIA AVIDERTGEV AVPGGDYHRA RMLLAAQGLP
QGLPDGNAML SDLPMGTSKS VETARLRQAQ ELDLARSITE ISAVSAARVH LALPERSAFL
RDSQPPRASV FLQVAPGRAL DGAQVEAIVN LVSSSVPGMA RQDVTVVDQM GRLLSRGSDD
PAVLLNDRQL QHRVQMETLY RNRIESLLSP ITGPGNLAVQ VTIDMDFTRQ EIREEQVDPD
RTAILSEQSQ VEESADPQAR GIPGAVANAP PPEAALAEGA PPTEAGAAPP ALRSRSQNST
RNFEISRKVE TTLPATARIA RVSAAVVIRA QPQPAPADPE APSPPLLPEA LQADLDRLTR
SAIGFDETRG DVVTITAQPF LDTIMPEPPG WTSQPWVADL ARQAFLLAAL AVVALGVVRP
ILNRVLLPAP AAAGALPLSP GEAAVEVGEG ETLDDVRARL KARQGALTKN MLDAARSHEE
QILVIRKLVE EDSGRIATTF RQMIASELDT VN
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