| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1639 |
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| Symbol | |
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| ID | 5082717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1682458 |
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| End bp | 1683594 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640483197 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_001167837 |
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| Protein GI | 146277678 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.125212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.71626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCA TCCAGATCAT CGGAACCGAC TTCGCCGCCG CCCACGCGCT GGAGGGGCTG
CTCGCGCGTC GCCGTGTCCG CTTGCAGGCC GGGACGGGTG GGCCGGTGGC GGTGCTGGCC
TGCTCGGCGC GCCACGAGGC CGCCTCGGGC GGTGCGCCGG GCATCACCGC GCTGGCCCGC
GCCGCCGGCG CCCGGGCGGT GGTGATCGTC GAGGAAGGCG CGGACGCGCT GGCCATCTCC
GGCGAGATGG GCGGCCGGCT GCTGCGCGTG GCGCTGCCGC GGGCCTCCGG CCAGCCGGCG
CACCGGGACG CGGCGCTTCT GATGCTGGCC GACGTGCTCG CCTCGCAGGT GTCGGCCATG
GTGGCGGCGG ATGCGGCCAC CGGGGCGCTG ATCGACCTCG CGGCGCGCGT GGCCCGCACC
GATGTCACCG TCTTCATCAA CGGGCCGACC GGCTCGGGCA AGGAAGTGCT CGCGCGCAAG
GTGCATGAGG CCAGCCGCCG GGCCGCCGCC CCCTTCATCG CGATCAACTG CGCGGCCATC
CCCGAGAACA TGCTGGAGGC CATCCTCTTC GGCCACGAGA AGGGCGCCTT CACCGGCGCC
TCGGGCGCCA ACAAGGGCAT CATCCGCGCG GCCGAGGGCG GCACGCTCCT GCTCGACGAA
GTGTCGGAAA TGCCGATGGG CCTGCAGTCC AAGCTTCTGC GCGTGCTGCA GGAGCGGCGC
GTCACGCCCC TTGGCAGCCA GACCGAGGTG CCCGTGGACG TGCGCATCAT CGCCACCTCG
AACCGCAACA TGCCCGAAGA GGTCCGCGCC CGCCGCTTCC GCGAGGACCT GTGGTACCGG
CTGAACGTCT TCCCGCTGAC GACGAAGCCC CTGTGCGAGC GCGAGGACGA CATTCCCGCG
CTTGCCGTCT CGCTTCTGCG CCGCCATTGC CCCGCCGACG TGGCGCTGCC GCTGGTGACG
CCCGACGCGA TGGAGGTGCT GCTGGCCCAC GACTGGCCCG GCAACGTGCG CGAGCTGGAG
AACGTGATCC AGCGCGCGCT GGTGCTGCAC GAGGACAGCC GGATCACCGC GGCCGACATC
GTGATCGACG CCGTGCCGCA GCTGCCGGTG CGCGCGCTGC ATCTCGCCGC GGTCTGA
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| Protein sequence | MAAIQIIGTD FAAAHALEGL LARRRVRLQA GTGGPVAVLA CSARHEAASG GAPGITALAR
AAGARAVVIV EEGADALAIS GEMGGRLLRV ALPRASGQPA HRDAALLMLA DVLASQVSAM
VAADAATGAL IDLAARVART DVTVFINGPT GSGKEVLARK VHEASRRAAA PFIAINCAAI
PENMLEAILF GHEKGAFTGA SGANKGIIRA AEGGTLLLDE VSEMPMGLQS KLLRVLQERR
VTPLGSQTEV PVDVRIIATS NRNMPEEVRA RRFREDLWYR LNVFPLTTKP LCEREDDIPA
LAVSLLRRHC PADVALPLVT PDAMEVLLAH DWPGNVRELE NVIQRALVLH EDSRITAADI
VIDAVPQLPV RALHLAAV
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