Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1630 |
Symbol | |
ID | 5082186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1671491 |
End bp | 1674670 |
Gene Length | 3180 bp |
Protein Length | 1059 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640483188 |
Product | putative CheA signal transduction histidine kinase |
Protein accession | YP_001167828 |
Protein GI | 146277669 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.571724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACG ATTTCGACGA GATGGACGAG ATCTGGGCGC TGTACGCCGA TGACGGCGCA CAGGCGCTTG ATGCAATGGA GGCCTCCCTT CTGGCGCTGA AGGCGGGGGC GGAACCGGGC GAGCATGTGG GCCCGCTGTT CCGCGCCGTC CACACGTTCA AGGGCAATTC GCGGGTGCTG GGGCTCTCGG TCGTCGAGAG CCGGGCGCAC CTTTCCGAGG ATCTGATCGG CCTCGTCCGC GACGAGGGCG TGCCGATGGA CGCCGAGATC GTCGAGATCC TTCTCTTCGC CTCGGACGTG CTGCGCACCA TGCTCGAGGA GACGGCGGCC ACGCGGGCCG ATGTGTCGCC CTCGGGTTCG GAAGAGCTGA TGGACCAGCT CCGGGACAAG ATCGCCCGCT GCAAGACGGG CGGGGGCGGC GAGGCACCGG CGCCCGAGCC CGAGCCGGGC CCGCCCTCCA GCGCCGAAGC GGGCAGCGAT GAGGGGCAGG GGGAGGCGGC GGACATGTCG CCCCCGCCCA CTGCCGCGGC TGCCGTTCCG ACCACCGCAG ACATCCTCGC GCTGCTCGAT GACACGGAGG CCGAGCCGGA GCCGGAGCCC GTGGTGTCGG CACCGCCAGT CGCGGCCGAG GCTCCGGCCG CCCCGCCTCC GGCTGCTTCG CCTCCGGCCG CTTCGGTTCC GGCCGAGCCG GCCCGCGCCA TCACGCGCCT GGCCGACGAT CCGACCTATC GCGCGATCTT TCGCGACATG GCGCAGGGGT CGCTGACCCG TTTCCGCGCG CAGCTGGCCC AGTTCGGCAG CGATCCCGCC GCGGCGGCCG CGTCCGCCCG ATCCGAGGCG GACGGGCTGA AGCACGCCGC CCGGCAGATG GGCCTTGACG ACTGGGAGGA GGCGCTGGCG GCCTTCCTGT CGGAACATGT CGATCTCGAG CGGCTGTCGG CCCTCATCCT GCGTCTGGAC GAGCTGATGG ACGCGCCGCC CGCCGCCCCT CCGCCGCCGC CCGGTGATTG TCCCTTCTTC GAGGCCATCG CCGAGCCGCT GGCGAAGGTG ACCCATCTGG GCGTGCGGAT CTCGACCGGA GAGACCCCGG CCTCCGACGA GCTGAGGACC GTGCTCGACA GGCTGTCCAC GGCGGCCCGC GCGGATGGCT ATGTGCGCGT CGTCGAGGCG GTCGAGGGCG TCGGATCGGC GACGGGCGCC GAGGGTTTCC GTGCCGCGGA ACTGAAGCTC TACGAGGAGC TGTCGGCGGT CGAGGCGGTC ATGCCCGAAG CGGCCGAGGC CGCGGGCGTC AGCCCCCGCC GCATCCTGCG CAGCTGGTGC GCCAGCCACG CGGCCGAGAC GCTGGCGGCC CTCGACGGGG TGCTCAACAG CCTGCGGTCC GCCGCGACCG ACGAGACCTT CCGGCGCTTT GACCGGCTCA TGCGCCTCGT CCACCACGCC TGCGAGCATT ATGCGCTCGA CACCGCGGCC CAGCTGGCCA TGTCGCTGGT GGACCTCTTC AGCCGGGTCC ATGCGACGGG GGCGGCGCCG GATGCGATGC TTGTCCACAT CGCCCGCGGC TTCATCGAGA CGATCGAACT TGCGTTCGAC GCGCTCGATC AGGGCGAGAA GCCGGCGATG GAGGTGCTCG ACCGTCTGTT CGAAGAGGCG GCGAACGTCT GCTTCGTCAC GGACGGGCTG ATGACGGCCG GCGCGGTCGA GCGGCGCCTC GGCCTGCCGC CGGACTTCCA CCGCGTCCTG TCGCCCGAGA GCGTCCGCGC GGCGGCCGAA GAGATGGAGA AGGGCCAGCG GTTCTACATC ATCCGCACCG ACATCAACAC CGACGACCGC ACCGCCGAAG CCTTCCTGGA GTGGTTGAGC GGCGATCAGG CCCGCTCGAT CACCAACGTC ACCGTCTTCC GCGGCACCGA GACGCTGTTC GACTTCCTGA TCTCCTCGCG CCTCGACGAG CCCGACCTGA TCGAGGCCCT TGTTCGGATG GACCCGTCGG GGCGCCGGCT GGCGCTGACC CATGCGCTGC GGCCGGGGGC CGCCGAGGCG CCCGTCACCG AGGCGCCGGG CGATGCGCCG CTGGCGCAGG GCGCCACGAT CACGCCCGAG ATGCTCGAGA CCATCGGCGA GATCTCGGCC AGCCATGCGA TGGTGCATCA CCTGCTGGCC GAGCTTGCCG AGAACGACCT CGCCGAGGAG ATGGAGGCGC TGATGCGGCA GGCGGGCGGC GACTGGCGGG CCGCCCGGCC CGCCGTGCGC GCGCTGCTCG ATGCCCACGC GGCCCGCCTG CAGGAGATCG CGCAGGCCGG CACCGCGCTG ACCTCTCAAC TGGCCGCGCT TCAGGAGGAA ACGGTCACGC TGCGCGCGCG CCCCGCGAGC ACGGTGCTCA GGCCGCTGCG GACCTTTGTC GAGACGCTCG CCCGCCGCCA CCGCCGGGAA GCATGTCTGA CCACCGCCGG GGATGAGCTG TCACTCGATC TGGCGCTTCT GGAACGGCTG CGGGGCCTGC TGCGGGGCCT GGTCGCGATC CGCCTCGAAC GTCCCGAGCG GGCGCCCTCA TCGCTCCATG TCACGCTGCG CCGCGATGAG GAGAGGGTGA TGGTGACGCT GCAGGACGAC GGCGCGCCGC AGCCCGACAC GCCGGCGCTC GTTGATCTTG CGGCGGGGAT CGCCCGCTCG AACGGCAGCT TCCGCGCGGT GCCGCTTCCG GGGGGCGGCA TGCGCTTCCA TCTGGCGCTG CCGCTGTCGA TGGTGGTGCT GGAAGGGATG GTCGTGGGGG TGGACGGGGT GCGCTACGTC CTGCCGGTCG ACTCGATCCG CACCATCCTG CAGGTCGAGC CGAGTGCCGC CATGACCATC TCGGCCGCGG GCGGCCAGCG CGTGCTGCGG ATCAGCGAGA CCGAGATCGT GGCGATCCAC GCGCTGCGCG GGCATCCGGC CGAGGGGCGG CGTGATCGTC CCTGGCCGGC CAGCCGCCGC GTCTTCGTGA TCCTCGGGAC GGGGGCGCGG TCGGTGGCGG TGCCGGTGGA TGAACTGGTG GGCCAGCAGC TCGTGCTGCT CCGCCCGCTG AGGGGCGTTC TGGCGCGCCT GACGCATCTG ACGGGGCTTG CGCTTCTGGC CGGCGGCGAC GTGGGAATGG TCCTTTCGGC CAATCGGATC TGCGAGCCGG CTCAGGCCGA AGCGGTCTGA
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Protein sequence | MSDDFDEMDE IWALYADDGA QALDAMEASL LALKAGAEPG EHVGPLFRAV HTFKGNSRVL GLSVVESRAH LSEDLIGLVR DEGVPMDAEI VEILLFASDV LRTMLEETAA TRADVSPSGS EELMDQLRDK IARCKTGGGG EAPAPEPEPG PPSSAEAGSD EGQGEAADMS PPPTAAAAVP TTADILALLD DTEAEPEPEP VVSAPPVAAE APAAPPPAAS PPAASVPAEP ARAITRLADD PTYRAIFRDM AQGSLTRFRA QLAQFGSDPA AAAASARSEA DGLKHAARQM GLDDWEEALA AFLSEHVDLE RLSALILRLD ELMDAPPAAP PPPPGDCPFF EAIAEPLAKV THLGVRISTG ETPASDELRT VLDRLSTAAR ADGYVRVVEA VEGVGSATGA EGFRAAELKL YEELSAVEAV MPEAAEAAGV SPRRILRSWC ASHAAETLAA LDGVLNSLRS AATDETFRRF DRLMRLVHHA CEHYALDTAA QLAMSLVDLF SRVHATGAAP DAMLVHIARG FIETIELAFD ALDQGEKPAM EVLDRLFEEA ANVCFVTDGL MTAGAVERRL GLPPDFHRVL SPESVRAAAE EMEKGQRFYI IRTDINTDDR TAEAFLEWLS GDQARSITNV TVFRGTETLF DFLISSRLDE PDLIEALVRM DPSGRRLALT HALRPGAAEA PVTEAPGDAP LAQGATITPE MLETIGEISA SHAMVHHLLA ELAENDLAEE MEALMRQAGG DWRAARPAVR ALLDAHAARL QEIAQAGTAL TSQLAALQEE TVTLRARPAS TVLRPLRTFV ETLARRHRRE ACLTTAGDEL SLDLALLERL RGLLRGLVAI RLERPERAPS SLHVTLRRDE ERVMVTLQDD GAPQPDTPAL VDLAAGIARS NGSFRAVPLP GGGMRFHLAL PLSMVVLEGM VVGVDGVRYV LPVDSIRTIL QVEPSAAMTI SAAGGQRVLR ISETEIVAIH ALRGHPAEGR RDRPWPASRR VFVILGTGAR SVAVPVDELV GQQLVLLRPL RGVLARLTHL TGLALLAGGD VGMVLSANRI CEPAQAEAV
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