| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1609 |
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| Symbol | |
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| ID | 5082165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1653176 |
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| End bp | 1654213 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640483167 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001167807 |
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| Protein GI | 146277648 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.469056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA GACGGAAGTT CATCACCACC GGCGCGCTGG CCGGTGCGGC CAGCCTTGCC
GCCCCCGCCG TCACCCGCGC GCAGGCACCG ATCAAGTGGC GGATGCAGAC CTATGCCGGG
GCCGCCCTTG GCGAGCATGT CGTGAAACCG GCGGTGGAGG CCTTCAACAC CATCGCCCAG
GGCCAGATGG AGATCGAGCT GTTCTACGCC GACCAGCTGG TGCCCACGGC CGAACTCTTC
CAGGCCATGC AGCGCGGCAC GATCGACTGC GTGCAATCCG ACGACGACTC GATGGCCTCG
CCGACCGAGG TGACGGTGTT CGGCGGCTAC TTCCCCATGG CGCTGCGCTA TTCGCTCGAC
GTGCCGGCGT TGTTCAACAA ATACGGGCTG GGCGAGATCT GGGCCGAGGA ATATGCCAAG
GTCGGCGTCA AGCACATCTC GGCGGGCTCG TGGGACCCGT GCAACTTCTC GACCAAGAAG
CCGATCAACA GCCTGGCCGA CCTGCAGGGC CTGCGCGTCT TCACCTTCCC GACCGCGGGG
CGCTTCCTGA CCCGCTTCGG CGTGGTGCCG GTGACGCTGC CCTGGGAGGA TGTCGAGGTC
GCGCTGCAGA CCGGGGAACT CGACGGCCTC GCCTGGTCGG GCATCACCGA GGTCTATACG
GTCGGCTGGG CCAACGTCAC CGACTACTTC CTGACCAACA ACATCTCGGG CGCCTGGATC
GGCCATTTCT TCGCCAACAT GGATCGCTGG AACGAGGTGC CGCCCCACCT GCAGGAGCTG
CTCCGCGTCT GCTTCGAGCA GTCGCATTAC TACCGGCAGC ACTGGTACTG GGCCGGCGAG
GCGCATCTGC GGGTGAACGA GACCAAGCTG AAGCTCACCA CCATCCCCGA TGAGGAATGG
GCGCAGGTCG AGAATGCCGC CGTCGAGTTC TGGGACGAAA TCGCGCAGGA ATCCGAGGTG
AAGGCCAAGG TGGTGCAGAT CATCAAGGAC TACAACGAGA CGATGAAGAA GGCCGGCCCG
CCCTACCGCT TCTCCTGA
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| Protein sequence | MTTRRKFITT GALAGAASLA APAVTRAQAP IKWRMQTYAG AALGEHVVKP AVEAFNTIAQ
GQMEIELFYA DQLVPTAELF QAMQRGTIDC VQSDDDSMAS PTEVTVFGGY FPMALRYSLD
VPALFNKYGL GEIWAEEYAK VGVKHISAGS WDPCNFSTKK PINSLADLQG LRVFTFPTAG
RFLTRFGVVP VTLPWEDVEV ALQTGELDGL AWSGITEVYT VGWANVTDYF LTNNISGAWI
GHFFANMDRW NEVPPHLQEL LRVCFEQSHY YRQHWYWAGE AHLRVNETKL KLTTIPDEEW
AQVENAAVEF WDEIAQESEV KAKVVQIIKD YNETMKKAGP PYRFS
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