| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1608 |
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| Symbol | |
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| ID | 5082164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1651793 |
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| End bp | 1653118 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640483166 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001167806 |
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| Protein GI | 146277647 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.158909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATG AGATGATCGC CATCCTGATG TTCTCGGCCA TGCTGCTGAT GATGCTGACC
GGGCAGCGCG TCTTTGGCGT GATCGGCTTT GTCGCCGTGG TGGCTTCGCT CGCGCTCTGG
GGCACGGGCG GGCAGAGCCT CGGCTTCTCG GCGGCGATGA AGCTGATGAA ATGGTATCCG
CTGCTGACCC TGCCCATGTT CATCTTCATG GGCTATGTCA TGAGCGAGAG CCGGCTGGCC
GATGATCTCT ACCGGATGTT CCATGTCTGG TTCGGCCCGG TTCCGGGTGG CCTCGCCATC
GGGACGATCC TCCTGATGGT GCTGATCTCG GCGATGAACG GGCTGTCGGT GGCGGGCATG
GCCATTGGCG CGACCATCGC CCTTCCCGAG CTCTTGCGCC GCAACTACGA CAAGCGGATG
GTCACGGGCG TGATCCAGGC CGGATCGAGC CTCGGCATCC TGATCCCGCC CTCGGTCGTT
CTGGTGCTTT ACGCCATGAT CGCGCGGCAG CCGGTGGGGC AGCTCTGGCT GGCGGGGATC
CTGCCGGGGC TGCTGATGGC CTCGCTCTTC GTGGCCTACA TCTGGTTGCG GTGCCGGCTG
AACCCCTCTC TCGGGCCCGT CCTGCCGCCC GAAGAGCTGG CCACCGTCTC GCGCGCCGAG
AAGATGCGCC TGCTGGCGGC GGGCCTTCTG CCGCTGGGGA TCTTCGCCTC GATGATGGTG
CCCTTCGTCA ACGGCTGGAC GAGCCTTGTG GAAAGCTCGG TCATCGGGGC GCTGGTCACG
GTGGCGGCGG CGGTGGTCAA GGGACGTTTC ACCCGCGAGG TGTTCGAGAC CTCGACGCGC
GCGACGCTGG CCATCTCGTG CATGTTCATG TGGATCATCC TCGCGGCGCT CGCCTTCGGC
GCGGTCTTTG ACGGACTGGG CGCGGTGCGG GCGATCCAGG GCTTCTTCGT GGACCGGCTG
GAACTGTCGC CCTGGACGAT CCTGATCATG ATGCAGCTCT CTTACCTCAT CATGGGGATG
TTCCTCGACG ATACGGCGAT GCTCGTGATC GTGGCGCCGC TTTACGTGCC GCTGGTGGGG
GTGCTGGGGT TCGACCTGAT CTGGTATGGC GTGCTCTACA CCATCACCTG CCAGATCGCC
TATCTGACGC CGCCCTTCGG CTACAACCTG TTCCTGATGC GGGCCATGGC CCCGCCCGAG
GTCAGCATCG GCGATATTTA CCGTTCGATC ATACCTTTCG TCGCAGTAAT GGTCGTGGCG
CTGGCGTTGG TGATGGCCTT CCCGCAGATT GCACTCTGGC TGCCTCAGAC GCTCTACGCC
AGATGA
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| Protein sequence | MSYEMIAILM FSAMLLMMLT GQRVFGVIGF VAVVASLALW GTGGQSLGFS AAMKLMKWYP
LLTLPMFIFM GYVMSESRLA DDLYRMFHVW FGPVPGGLAI GTILLMVLIS AMNGLSVAGM
AIGATIALPE LLRRNYDKRM VTGVIQAGSS LGILIPPSVV LVLYAMIARQ PVGQLWLAGI
LPGLLMASLF VAYIWLRCRL NPSLGPVLPP EELATVSRAE KMRLLAAGLL PLGIFASMMV
PFVNGWTSLV ESSVIGALVT VAAAVVKGRF TREVFETSTR ATLAISCMFM WIILAALAFG
AVFDGLGAVR AIQGFFVDRL ELSPWTILIM MQLSYLIMGM FLDDTAMLVI VAPLYVPLVG
VLGFDLIWYG VLYTITCQIA YLTPPFGYNL FLMRAMAPPE VSIGDIYRSI IPFVAVMVVA
LALVMAFPQI ALWLPQTLYA R
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