Gene Rsph17025_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1601 
Symbol 
ID5082157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1644920 
End bp1645834 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID640483159 
Productrod shape-determining protein MreC 
Protein accessionYP_001167799 
Protein GI146277640 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGCG ACCGGACCAG ACCGGAGGAT TTCACCCGTC CGCTCCGCCG CATCCTCGTC 
GGCGGGCTGG TTCTGCTGCT GCTCGGGATC TTCCTGATCT GGCGGATCGA CAGCCCGCGG
GTCGAGCAGT TCCGCGCCGC CCTGATCGAC CGCGTGGTGC CCTCGTTCGA ATGGCTCATG
ACGCCGATGA CCAAGGTCGC GGGCATGGTC GAGAACTTCC AGTCCTACAC GAGGATCTAC
GAACAGAATC AGGAGCTTCG GCGCGAGCTT CAGCAGATGA AGGCCTGGAA GGAAGCGGCC
CTCCAGCTGG AACAGAAGAA CGCCCGCCTC CTCGACCTCA ATCAGGTGCG GCTCGACCCG
AAGCTGACCC ATGTCACGGG CGTGGTGCTG GCCGACTCGG GCTCGCCCTT CCGGCAGTCG
GTGCTCTTGA ACGTGGGCGC GCGCGACGGC ATCCGCGACG GCTGGGCCAC GATGGACGGC
ATCGGGCTGG TGGGGCGGAT CTCGGGCGTG GGGCGCAGGA CCAGCCGGGT GATCCTGCTC
AGCGACACGA ACAGCCGCAT CCCGGTGACG GTGCAACCCT CCGGCCAGCG CGCGCTGTTG
ACCGGTGACA ACTCGCCCTC TCCACCGCTC GAGTTCCTCG ACAAGCCGGA TCTGGTGCGC
CCCGGAGACC GGGTGGTGAC CTCGGGCGAT GGCGGGGTCT TTCCGGCCGA TCTTCTGGTC
GGTCAGGTCG CGCAGGGGCC GGACCGGCGG CTGCGGGTGC GCCTTGCGGC CGATTACGGC
CGGCTCGAGT TCCTGCGCGT CCTGCGCAGC CACGAGCTTG AGCCAATCAG CGACCCCGGC
GGCCTCGTGG CGCAGCCGCC GGCCCCTCCG GCCGGCCCGC CGATGACGGC CACGGCGGAG
GGCGCCGATG GCTGA
 
Protein sequence
MARDRTRPED FTRPLRRILV GGLVLLLLGI FLIWRIDSPR VEQFRAALID RVVPSFEWLM 
TPMTKVAGMV ENFQSYTRIY EQNQELRREL QQMKAWKEAA LQLEQKNARL LDLNQVRLDP
KLTHVTGVVL ADSGSPFRQS VLLNVGARDG IRDGWATMDG IGLVGRISGV GRRTSRVILL
SDTNSRIPVT VQPSGQRALL TGDNSPSPPL EFLDKPDLVR PGDRVVTSGD GGVFPADLLV
GQVAQGPDRR LRVRLAADYG RLEFLRVLRS HELEPISDPG GLVAQPPAPP AGPPMTATAE
GADG