| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1570 |
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| Symbol | |
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| ID | 5082381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1610323 |
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| End bp | 1612143 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640483128 |
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| Product | pepF/M3 family oligoendopeptidase |
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| Protein accession | YP_001167768 |
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| Protein GI | 146277609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.713222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.288392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC CCCTGCCTCG CCCGGTCCAT GACGCCAACG CCAGCGCCGG GGGCCTAGGG
AACCTGCCCG AATGGGATCT GCGCGACCTC TATCCCGCGC CCGACGCGGC CGAGGTTGGT
CAGGACATGG CCTGGCTCAA GTCCGCCTGC GCCGACTTCG CCGCCACCTA CGAAGGCAAG
CTGGCAAGCC TCGACGCGGC GGGCCTGCTG ACCTGCGTCG AGACCTACGA GAAGATCGAC
ATCACCGCCG GGCGGCTGAT GTCCTACGCG GGGCTGCGCT ACTACCAGAA CACGATGGAC
AGCGAGCGCG CCAAGTTCAT GGCCGACGCG CAGGACAAGG TGACGGACTA CACCACCGCG
CTCGTCTTCT TCAGCCTCGA GTTCAACCGG CTCGACGACG CTCACCTCGA GTCGCGGCTG
GCGGAAAGCC CCGCCCTTGC CCGCTACCGG CCCGTCTTCG ACCGGATGCG CGCCATGCGC
CCGCACCAGC TGTCGGACGA GCTGGAACGG TTCCTCCACG ACCAGTCCAC CGTGGGCGCC
GCCGCGTGGA ACCGGCTCTT CGACGAGACG ATGGCAGGGC TCACCTTCAC GATCGAGGGC
GAGGAGCTGA ACCTCGAATC CACCCTCAAC CTGCTGACCG ACCCCGAGCG GTCGCGCCGC
GAGGCCGCCG CCCGCGCGCT GGCCGATGTG TTTGGCGGCC ACATCAAGCT CTTTGCCCGC
GTGCACAACA CGCTGGCCAA GGAAAAGGAG ATCCACGACC GCTGGCGCAA GATGCCCACC
CCTCAATATG GCCGGCACCT CGCCAACCAT GTCGAGCCCG AGGTGGTCGA GGCGCTGCGC
AACGCCGTGG TCGCGGCCTA CCCCAAGCTC TCGCACCGCT ATTACCGGCT GAAGGCGAAA
TGGATGGGGC TCGACAAGCT GCAGGTCTGG GACCGCAACG CCCCGCTGCC GATCGAGACC
CCGCGCCTCG TGGACTGGAC AGAGGCGCAG GCCACGGTGC TCGAGGCCTA TTCGGCCTTC
GATCCGAGGA TGGCCGAGAT CGCGCAGCCC TTCTTCGACA AGGGCTGGAT CGACGCGGGC
GTGAAGCCCG GCAAGGCCCC CGGCGCCTTT GCCCACCCGA CCGTGACCAC CGTCCACCCC
TATGTGATGC TGAACTATCT CGGCAAGCCG CGCGACGTGA TGACGCTGGC GCATGAGCTG
GGTCACGGCG TCCATCAGGT GCTGGCGGCG GGACAGGGAG AGCTGCTTTC CTCCACGCCC
CTCACCCTCG CCGAAACGGC GAGCGTGTTC GGCGAGATGC TGACCTTCCG CAAGCTCCTC
GATGCCGCCA GGACCCCGGC CGAACGCAAG ACGCTGCTGG CCGGCAAGGT CGAGGACATG
ATCAACACGG TCGTGCGCCA GATCGCCTTC TACGACTTCG AATGCAAGCT GCACGAGGCG
CGCCGGCAGG GCGAGCTGAC GCCCGAGGAC ATCAACGCCC TCTGGATGAG CGTGCAGGCC
CAAAGCCTCG GCGATGCGTT CGAGTTCATG GAGGGCTACG AGACCTTCTG GTCCTACATC
CCCCATTTCG TCCATTCGCC CTTCTACGTC TATGCCTATG CCTTTGGCGA CGGTCTGGTG
AATGCGCTCT ATGCCGTCTA TGCCGAGGGG GGCGAAGGCT TCGAGGACAA GTATTTCGAG
ATGCTCGCGG CGGGCGGCTC CAAGCACCAC AAGGAGCTTC TGGCGCCCTT CGGCCTCGAT
GCGAGCGACC CGACCTTCTG GGACAAGGGC CTGAGCATGA TCGCAGGCTT CATCGACGAG
CTGGAAGCCA TGGACGGTTG A
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| Protein sequence | MTLPLPRPVH DANASAGGLG NLPEWDLRDL YPAPDAAEVG QDMAWLKSAC ADFAATYEGK
LASLDAAGLL TCVETYEKID ITAGRLMSYA GLRYYQNTMD SERAKFMADA QDKVTDYTTA
LVFFSLEFNR LDDAHLESRL AESPALARYR PVFDRMRAMR PHQLSDELER FLHDQSTVGA
AAWNRLFDET MAGLTFTIEG EELNLESTLN LLTDPERSRR EAAARALADV FGGHIKLFAR
VHNTLAKEKE IHDRWRKMPT PQYGRHLANH VEPEVVEALR NAVVAAYPKL SHRYYRLKAK
WMGLDKLQVW DRNAPLPIET PRLVDWTEAQ ATVLEAYSAF DPRMAEIAQP FFDKGWIDAG
VKPGKAPGAF AHPTVTTVHP YVMLNYLGKP RDVMTLAHEL GHGVHQVLAA GQGELLSSTP
LTLAETASVF GEMLTFRKLL DAARTPAERK TLLAGKVEDM INTVVRQIAF YDFECKLHEA
RRQGELTPED INALWMSVQA QSLGDAFEFM EGYETFWSYI PHFVHSPFYV YAYAFGDGLV
NALYAVYAEG GEGFEDKYFE MLAAGGSKHH KELLAPFGLD ASDPTFWDKG LSMIAGFIDE
LEAMDG
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