Gene Rsph17025_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1555 
Symbol 
ID5084279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1594512 
End bp1596110 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content69% 
IMG OID640483114 
Productcoenzyme A transferase 
Protein accessionYP_001167754 
Protein GI146277595 
COG category[I] Lipid transport and metabolism 
COG ID[COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.431711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.989893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGA TCATGTCGGC GACAGATGCC ATCGCGCTGA TTCCCGACGG ATGCACGCTG 
GGCGTGACCG GGACGGGACC GGCGCTGGAG CCGGATTTTC TGCTGGCCAC GCTCGAGCAG
CGCTTCCTGA CCGAGGGCCG GCCGGGCGCG CTCTCGCTCT TCCTGCCGAT GCTGCCGGGG
GACCGGAAGG GCGAGGGCGG CCTGAACAGC TTTGCCCACA AGGGCATGAT GCGGCAGGTC
ATGGGCGCCT CGTTCAGCCG CGCGCGCCAT CCGGCCTTCC TCGACATCAT GGAGACCGGC
GAGGTCGAAG GCTACATCAC CGGCATGGGC ACGATGATCC AGATCCTGAC CGCGACCGGA
TCGGGCAAGC CGGGGGTGGT GACGAAGGTC GGTCTGGGCA CCTTCATCGA TCCCCGCCAC
GGCGGCGGCG CGATGAACGC GGCCTCGGTC AGCCCGCCGG TGCGGCTGAT CGAGATCGAG
GGCGAGGAGA TGCTGTTCTA TCCCGCCCAG AAGATCGACG TGGCGCTGAT CCGCGGCACC
ACCGCCGACG AGAACGGCTA TGTCAGCTTC GAGGAAGAGA CGAACACGCT GGGCGCGGTC
GAGATGGCGC TGGCCTGCAA GGCCTCGGGC GGGACGGTCA TCGTGCAGGT GAAAAGGGTG
GCGCGGGCCG GCAGCCTCGA TCCCCGCACG GTGCGGATCC CGGGGCCGCT GATCGACGCC
ATCGTGGTGC ATCCGGCGCA GACGCAGCTG TCGCCGATGA TGGCCGATCC CGCGCATGGC
TGGAATCCCT TCCTGGCCGG CGCCCTGAAG CGACCGCTCG ACGACATCCC GCCGCTGCCG
CTGTCGGCGG AAAAGGCGCT GCTGCGCCGC GCCGCGCTGG AGCTGCGCGA GGGCGACGTG
ATCAACCTTG GGGCGGGCGT GGCCACGCGT CTGCCGATCG TCGCGCTCGA GGAGGGCATC
CTCGACCGCG TCACCTTCAC CAACGAGCAC GGCATCTTCG GCGGGCTGAT GGCTACGGCC
GTCGGCGGCT CCTTCGTGCC CGCCTTCAAC GCCGATGCGA TCATGGATTC GGTCTTCCAG
TTCAACTTCT ACGACGGAGG CGGGCTCGAC GTCACCTTCC TCGGGATCGG GCAGGTCGAT
GGCTCGGGCA ACCTCAACGT CAGCCGCTTC GGCGCCGAGG TGAACGGGCC GGGCGGCTTC
ATCAACATCA CCTCGAAGAC CCGGCGCATC GTCTTCTGCG GCACGCTGAC CAGCGGCGGC
CTGCGCAGCC GGATCGACGA GGGCCGGCTT CGGATCGAGC AGGAGGGCCG CTTTGGCAAG
TTCGTCCCCC GCGTCGAGGA GGTGACCTTC AACGCGGCCG AGGCGAGGGC GCGCGGGCAG
GAGGTGCTTT ACATCACCGA TCGCGCGGTC TTCCGCCTGG GCGATACCGG CCCCGAGCTG
ATCGAGATCG CGCCCGGGAT CGACCTCGAC CGCGACATCC GCAGCCGCGT GGGCTTCGAG
CTTGCCGTGT CGCCGCGGCT CTCGGTCATG GCGGAGGCGC TGTTCCGCGA GCCGCTGCTG
GGCCTTGCCT CGAGCCTGCC GAAAGGAGAC CGCGCGTGA
 
Protein sequence
MSKIMSATDA IALIPDGCTL GVTGTGPALE PDFLLATLEQ RFLTEGRPGA LSLFLPMLPG 
DRKGEGGLNS FAHKGMMRQV MGASFSRARH PAFLDIMETG EVEGYITGMG TMIQILTATG
SGKPGVVTKV GLGTFIDPRH GGGAMNAASV SPPVRLIEIE GEEMLFYPAQ KIDVALIRGT
TADENGYVSF EEETNTLGAV EMALACKASG GTVIVQVKRV ARAGSLDPRT VRIPGPLIDA
IVVHPAQTQL SPMMADPAHG WNPFLAGALK RPLDDIPPLP LSAEKALLRR AALELREGDV
INLGAGVATR LPIVALEEGI LDRVTFTNEH GIFGGLMATA VGGSFVPAFN ADAIMDSVFQ
FNFYDGGGLD VTFLGIGQVD GSGNLNVSRF GAEVNGPGGF INITSKTRRI VFCGTLTSGG
LRSRIDEGRL RIEQEGRFGK FVPRVEEVTF NAAEARARGQ EVLYITDRAV FRLGDTGPEL
IEIAPGIDLD RDIRSRVGFE LAVSPRLSVM AEALFREPLL GLASSLPKGD RA