Gene Rsph17025_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1545 
Symbol 
ID5084269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1584069 
End bp1584581 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID640483104 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_001167744 
Protein GI146277585 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAT TTTCCAAAGG TCTGAGCGTG CTGGAGGCCC TCTTGTCGCG GGTCATCCTC 
GGCTTCTACG CTCTCGTCGT CTGCGTCGTC GTCTTTCAGG TCGTGAACCG CTTCTGGTTG
CACCTGCCAA TCATCTGGCT GTCCGACCTT GCCATCATCA GCTTCATCTG GCTCGGGTTC
CTGACAGCCG CGCTGGCGGT GCGGCGCGGC GGGCATTTCC GCATGGCACT CATGCTCGAC
CTCGCGGGCG AGGGGCGGAT GCGCCGCGGG CTCGAGCTGT TCTCGCACCT CGTCGGGCTT
GCGATGTTCG GGCTGCTGGC CGTCACCGGC TGGCAGATGG CGGTGCGTGG CCTGCGCGAG
ATCTCGCCCG GCCTGCAGAT CCCGATGAGC TGGGCCTATG CCTCGGTCGT GGTCGCGGGC
CTGCTGGCGG TGCTGTTCCT TCTCGAGGCC ATCGCGCTCG AGCTGGCCGG CAAGGCCCGC
GCGGCCGGCC CTGATCCCGA ACGGGAGGAG TGA
 
Protein sequence
MKGFSKGLSV LEALLSRVIL GFYALVVCVV VFQVVNRFWL HLPIIWLSDL AIISFIWLGF 
LTAALAVRRG GHFRMALMLD LAGEGRMRRG LELFSHLVGL AMFGLLAVTG WQMAVRGLRE
ISPGLQIPMS WAYASVVVAG LLAVLFLLEA IALELAGKAR AAGPDPEREE