Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1545 |
Symbol | |
ID | 5084269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1584069 |
End bp | 1584581 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640483104 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001167744 |
Protein GI | 146277585 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGAT TTTCCAAAGG TCTGAGCGTG CTGGAGGCCC TCTTGTCGCG GGTCATCCTC GGCTTCTACG CTCTCGTCGT CTGCGTCGTC GTCTTTCAGG TCGTGAACCG CTTCTGGTTG CACCTGCCAA TCATCTGGCT GTCCGACCTT GCCATCATCA GCTTCATCTG GCTCGGGTTC CTGACAGCCG CGCTGGCGGT GCGGCGCGGC GGGCATTTCC GCATGGCACT CATGCTCGAC CTCGCGGGCG AGGGGCGGAT GCGCCGCGGG CTCGAGCTGT TCTCGCACCT CGTCGGGCTT GCGATGTTCG GGCTGCTGGC CGTCACCGGC TGGCAGATGG CGGTGCGTGG CCTGCGCGAG ATCTCGCCCG GCCTGCAGAT CCCGATGAGC TGGGCCTATG CCTCGGTCGT GGTCGCGGGC CTGCTGGCGG TGCTGTTCCT TCTCGAGGCC ATCGCGCTCG AGCTGGCCGG CAAGGCCCGC GCGGCCGGCC CTGATCCCGA ACGGGAGGAG TGA
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Protein sequence | MKGFSKGLSV LEALLSRVIL GFYALVVCVV VFQVVNRFWL HLPIIWLSDL AIISFIWLGF LTAALAVRRG GHFRMALMLD LAGEGRMRRG LELFSHLVGL AMFGLLAVTG WQMAVRGLRE ISPGLQIPMS WAYASVVVAG LLAVLFLLEA IALELAGKAR AAGPDPEREE
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