| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1544 |
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| Symbol | |
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| ID | 5084268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1582768 |
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| End bp | 1584066 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483103 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001167743 |
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| Protein GI | 146277584 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACCCGA TTACCCTCGT CTTCGGCAGC CTCGTGGTGT TCCTGCTCTT CGGCGTGCCG
GTGGCCTATG CGCTTGGAAT GTCCTCGCTT CTGGTCATCG TCTGGGCCGA CCTGCCGCTC
TCGATCTTCG CGCAGCGCGC CTACCAGTCG CTCGACAGCT TCGTGATGCT GGCGGTGCCC
TTCTTCCTGC TCGTGGGCCT GCTTATGAAC AGCGCCGGCA TCTCGGCGCG GATGCTGGAG
CTGGCCGGGG CGATGTTCGG CCGGACGCGC GGGGCGCTGG CCAAGGTCAA TGTCGCCGTC
AGCATGTTGT TTGCGGGCCT TTCCGGCTCG TCGGTGGCGG ATGTGGCGGG GATGGGGTCG
GTCCTGATCC CGGCGATGAT CCGCGAGGGC TATCCCCGCG CCTTTGCCGT GGCCGTGACC
GCGGCCTCGT CCACCATCGG CATCATCATC CCGCCGAGCA TCTTCATGGT GGTCTATGGC
GCGGTGGGCG ATGTCTCGAT CGGCGCGCTC TTTCTGGCCG GCGCCCTTCC GGGGCTCCTG
ATCGGTGTCA CGCAGATCAC CTTCTGCCAC CTGCTCGCGA TCCGCCAGAA CCATCCGGTC
GGCCAGCCCT TCTCGCTCGC CCGGCTGGGC CGGGCGGCGC AGCGGGGCGT GCTGCCCTTC
GGCGTCACGG TGGTCATCAT CGGAGGCATC ATCGGCGGCA TCTTCACCGC GACCGAGGCC
GCTGCCGTCG CCGTCATCTA CACGCTGCTG CTGGGGATCT TCTACCGGAC GCTGAAGCTG
CGCGGCCTGA TCGACTCGTT CCACGGGGCT GCGGTCCATC TGGGGCCCAC GCTGCTCTGC
GTGGCCACCG GCAGCGTCTT TGCCTGGGTG CTGGCCTTCC TGCAGGTGCC GAACGAGGTC
TCGCGGATGG TGGCCTACCT CGATCCCTCG CCCTCGATGG TGCTCATGTT CATCATGGTG
CTCTTCGTCA TCGTCGGCAC CTTCGAGAGC GGCGTGGCCT CGATCATCAT CTTCCTGCCC
ATCGTGCAGC CCATCGCCGC GGCGGCGGGG CTCGATCCGG TGCATGTCGG GGTGATCGTC
TGCATGACCC TGGCGCTGGG GCTGATCACG CCGCCCTACG GGCTCTGCCT GTTCGTCGCG
GCCAGGATCG GCGGCATCTC GGTCGAACGT TCGTTCGTGG CGGTGCTGCC CTGGATCGGC
CTGTTCCTGG TCGTCGACGT GATCTGCGTG CTGCTGCCCG ATCTGGTGCT GTTCCTGCCG
CGGCTTCTGG TGCCGCAGTT CATGGGGATG CCGCAGTAG
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| Protein sequence | MDPITLVFGS LVVFLLFGVP VAYALGMSSL LVIVWADLPL SIFAQRAYQS LDSFVMLAVP
FFLLVGLLMN SAGISARMLE LAGAMFGRTR GALAKVNVAV SMLFAGLSGS SVADVAGMGS
VLIPAMIREG YPRAFAVAVT AASSTIGIII PPSIFMVVYG AVGDVSIGAL FLAGALPGLL
IGVTQITFCH LLAIRQNHPV GQPFSLARLG RAAQRGVLPF GVTVVIIGGI IGGIFTATEA
AAVAVIYTLL LGIFYRTLKL RGLIDSFHGA AVHLGPTLLC VATGSVFAWV LAFLQVPNEV
SRMVAYLDPS PSMVLMFIMV LFVIVGTFES GVASIIIFLP IVQPIAAAAG LDPVHVGVIV
CMTLALGLIT PPYGLCLFVA ARIGGISVER SFVAVLPWIG LFLVVDVICV LLPDLVLFLP
RLLVPQFMGM PQ
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