| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1542 |
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| Symbol | |
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| ID | 5084266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1580672 |
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| End bp | 1581685 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483101 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001167741 |
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| Protein GI | 146277582 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC TGCGTCGAAC CATCACGGGC GCCGCGACCG GGCTGCTTCT GGCCCTGCCG
GGCGTGGCCC TCGCCGGGAC AACCCTGCGC GTGGCCAGCG AGGAGGCCTT TGCCACACCG
GCCAAGGTCG CGGCCCAGTC CGCGCTCGAA CATGTCGAGA AGACCCTGCC GGATGCGACC
GGCGGCGAGG TGAGCGTGCA GCTCTATCCG GGCGGCGCGC TCGGCAGCGA GAAGGAGCTG
ATCAAGGCGC TGGCCGATGG CACGGTCGAT GCGATGGTGC TCTCGCCCGG AAACGCGGCC
GGCATCGTGC CCGAGGTGCA GCTGTTCAGC GCGAGCTATC TCTTTGAAAG CTATGACCAT
GCCCGCGCCG TCATCAAGGA CGATGCGTTC TTCGAGGCGC TGGCGCAGAT CATCGCCGAA
AAGCAGGCGG GCTTCCAGCT GGCCGGGATC GGCCTGACCG GCACGCGCAA CTACTACAGC
CGCAGCCGGG CGGTCGAGAC GATCGAGGAT CTCTCGGGCG TCAAGATGCG CGTCATGTCC
TCTCCGACCG AGTTCAAGGT CTGGAGCGAG CTGGGCACGC TGCCCACCAC GATCCCGGCG
CCCGAGATCT ACACGTCGCT GCAGACCGGC GTGGTCGATG CCGCCGAAAG CAGCCTGCCG
GCCATCTCGG GAAGCAAGTA TTACGAGGTC GCCCCCTACA TCTCGCTGAC CCAGCACCAG
TTCAACCTGC ATCTCTTCCT CGTCTCGGAC ATTGCGATGT CGCGGCTGTC CGAGGGTCAG
CAGGCGGCGG TTCTGCAGGC GTTCCGCGAG GCGGGGCATA TCGAGATCGA CGAGGCGATC
CGGCTGAGCG ACGAGGTGCT GGCCTTCCTG CGCGAGCGGC CCGGCGTGAC GGTGACCGAG
GTCGATACCG CGCCTTTCGC GCAGAAGTTG CGCGCCGTGC AGGATGAGGT GGCCACCGGC
CTCGGCGTCG AGCCGCTGCT CGAGATCATT CGCAGCCACG GAACGCAGGG ATGA
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| Protein sequence | MKILRRTITG AATGLLLALP GVALAGTTLR VASEEAFATP AKVAAQSALE HVEKTLPDAT
GGEVSVQLYP GGALGSEKEL IKALADGTVD AMVLSPGNAA GIVPEVQLFS ASYLFESYDH
ARAVIKDDAF FEALAQIIAE KQAGFQLAGI GLTGTRNYYS RSRAVETIED LSGVKMRVMS
SPTEFKVWSE LGTLPTTIPA PEIYTSLQTG VVDAAESSLP AISGSKYYEV APYISLTQHQ
FNLHLFLVSD IAMSRLSEGQ QAAVLQAFRE AGHIEIDEAI RLSDEVLAFL RERPGVTVTE
VDTAPFAQKL RAVQDEVATG LGVEPLLEII RSHGTQG
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