| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1537 |
|---|
| Symbol | |
|---|
| ID | 5084261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1575947 |
|---|
| End bp | 1576978 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640483096 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001167736 |
|---|
| Protein GI | 146277577 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCG TGGGAGGCCC TTCGGCCGGA CGGATCGCCG AGATCGCAGG AGTGTCGAAA
TCCACCGTGT CCCGCGCGCT CTCCGGGCAT CCCAGCATCT CGGACGGCAC GCGCAAGCGG
ATCCTGAAGA TCGCCCACGA GATCGGCTAC GAGCCGAACG CGATGGCCAG CAGCCTCGTC
ACCGCCCGCA GCGGGGTGAT CGGCTTCGTC ATCGGCGAGA TGGAGAACCC GTTCTACCAG
GAACATATCG AGAAGGTCGC GCGGATCTCG GCCGCCGCCG GCACGCAGCT CATGCTGTTC
CAGGTGCCGC AGGACGGCGA GCTGGCCGAT GTGGTTCCGG CGATGGCGCG CTACCGGCTG
GAGGGCTGCA TCGTCATCGC CTCCGTCCGT ACGAACGCGA AGTCGCTGAC CGCCTGCCGG
TTGCACGGCA TTCCGGTCGT GCTGATCAAC CGGGTCGTGC ACGACGGCTC GGCCTCGTCG
GTGCTCTGTC ACAACGAGGC GGGCGGGCAC GAGCTGGGCC GCTTCCTGCT GGCGGGCGGC
CACCGGCGCA TCGCGATCAT CTCGGGGCGC GCCGATTCGA TCGTGAACCG CGACCGACTG
ACCGGCTTTC GCGCGGCGCT CGCCGAAGCG GGGGTGCGCG AGGTGGCCGA AGTGAACGGC
GATTTCCGCT TCGAGGCCGC CTATCAGGCC GCGCGCGAGC TGCTGTCCGC GGAGCCGCGC
TGCGACGCCA TCTTCGCCGT CAGCGACCTG ATGGCCTGTG GCGCAATCGA CGCCGCCCGC
GATCTTGCCG TGCGGGTGCC GGACGATCTG TCGATCGTCG GATTCGACGG CATCCGCACC
GCGGCCTGGC CCGCCTACCG CCTCACCACG GTGGCGCAGC CGGCCGATGC GATCCTCTCG
CGTGCCGTGG CGCTCATCGC CGCGCGCGAT CCGAACCGCG CGCCCGAGAT TTCCTACATC
AACGGACTCT TGAAGGTGCG CCGCTCGGCC AGGGTGCCCG CGGGCTACGC GCCCGAGCCG
GAGTATCTCT GA
|
|---|
| Protein sequence | MKVVGGPSAG RIAEIAGVSK STVSRALSGH PSISDGTRKR ILKIAHEIGY EPNAMASSLV
TARSGVIGFV IGEMENPFYQ EHIEKVARIS AAAGTQLMLF QVPQDGELAD VVPAMARYRL
EGCIVIASVR TNAKSLTACR LHGIPVVLIN RVVHDGSASS VLCHNEAGGH ELGRFLLAGG
HRRIAIISGR ADSIVNRDRL TGFRAALAEA GVREVAEVNG DFRFEAAYQA ARELLSAEPR
CDAIFAVSDL MACGAIDAAR DLAVRVPDDL SIVGFDGIRT AAWPAYRLTT VAQPADAILS
RAVALIAARD PNRAPEISYI NGLLKVRRSA RVPAGYAPEP EYL
|
|---|
| |