Gene Rsph17025_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1507 
Symbol 
ID5084756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1545677 
End bp1546450 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID640483064 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_001167706 
Protein GI146277547 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0183743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA AAGGCAAGAG GGCCATCGTC ACCGGCTCGA ACTCGGGCAT CGGGCTTGGC 
TGCGCCGAGG AACTGGCGCG GGCAGGGGCC GAGGTGATCA TCAACTCCTT CACCGACCGC
GACGAGGATC ATGCCCTAGC CGAGAAGATC GGCCGCGAGC ATGGCGTCCC GTGCCGCTAC
ATCGCCGCCG ACATGTCGAA GGGCGAGGAG TGCCGGGCGC TGGTCGAGAG GGCGGGCGGC
TGCGACATTC TCGTGAACAA TGCGGGCATC CAGCATGTCG CCTCCATCGA GGAGTTCCCG
GCCGGGAAGT GGGACGCGAT CCTGGCGATC AACCTCTCGT CGGCCTTCCA CACCACGGCG
GCCGCCCTGC CGGGGATGCG CGCGGCGGGC TGGGGGCGGA TCGTCAACAT CGCCTCGGCG
CATGGCCTGA CGGCGAGCCC CTACAAGTCG GCCTATGTGG CGGCCAAGCA CGGGGTGGTG
GGATTCACCA AGGTCACCGC GCTGGAGACC GCGGGCAAGG GGATCACCTG CAACGCGATC
TGCCCCGGCT ATGTGCTGAC GCCGCTCGTC GAGGCCCAGA TCCCCGACCA GATGAAGGCG
CATGACATGG ACCGCGAGAC GGTGATCCGC GAGGTCATGC TGCAGCGCCA GCCCTCGCGG
CAGTTCGCGA CGACGGCGCA GATCGGCGGC ACGGTCGTGT TCCTCTGCAC GGCGGCGGCG
GAGCAGATCA CCGGCACCAC GATCTCGGTG GATGGCGGCT GGACGGCGCT CTGA
 
Protein sequence
MDLKGKRAIV TGSNSGIGLG CAEELARAGA EVIINSFTDR DEDHALAEKI GREHGVPCRY 
IAADMSKGEE CRALVERAGG CDILVNNAGI QHVASIEEFP AGKWDAILAI NLSSAFHTTA
AALPGMRAAG WGRIVNIASA HGLTASPYKS AYVAAKHGVV GFTKVTALET AGKGITCNAI
CPGYVLTPLV EAQIPDQMKA HDMDRETVIR EVMLQRQPSR QFATTAQIGG TVVFLCTAAA
EQITGTTISV DGGWTAL