Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1507 |
Symbol | |
ID | 5084756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1545677 |
End bp | 1546450 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483064 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001167706 |
Protein GI | 146277547 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0183743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA AAGGCAAGAG GGCCATCGTC ACCGGCTCGA ACTCGGGCAT CGGGCTTGGC TGCGCCGAGG AACTGGCGCG GGCAGGGGCC GAGGTGATCA TCAACTCCTT CACCGACCGC GACGAGGATC ATGCCCTAGC CGAGAAGATC GGCCGCGAGC ATGGCGTCCC GTGCCGCTAC ATCGCCGCCG ACATGTCGAA GGGCGAGGAG TGCCGGGCGC TGGTCGAGAG GGCGGGCGGC TGCGACATTC TCGTGAACAA TGCGGGCATC CAGCATGTCG CCTCCATCGA GGAGTTCCCG GCCGGGAAGT GGGACGCGAT CCTGGCGATC AACCTCTCGT CGGCCTTCCA CACCACGGCG GCCGCCCTGC CGGGGATGCG CGCGGCGGGC TGGGGGCGGA TCGTCAACAT CGCCTCGGCG CATGGCCTGA CGGCGAGCCC CTACAAGTCG GCCTATGTGG CGGCCAAGCA CGGGGTGGTG GGATTCACCA AGGTCACCGC GCTGGAGACC GCGGGCAAGG GGATCACCTG CAACGCGATC TGCCCCGGCT ATGTGCTGAC GCCGCTCGTC GAGGCCCAGA TCCCCGACCA GATGAAGGCG CATGACATGG ACCGCGAGAC GGTGATCCGC GAGGTCATGC TGCAGCGCCA GCCCTCGCGG CAGTTCGCGA CGACGGCGCA GATCGGCGGC ACGGTCGTGT TCCTCTGCAC GGCGGCGGCG GAGCAGATCA CCGGCACCAC GATCTCGGTG GATGGCGGCT GGACGGCGCT CTGA
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Protein sequence | MDLKGKRAIV TGSNSGIGLG CAEELARAGA EVIINSFTDR DEDHALAEKI GREHGVPCRY IAADMSKGEE CRALVERAGG CDILVNNAGI QHVASIEEFP AGKWDAILAI NLSSAFHTTA AALPGMRAAG WGRIVNIASA HGLTASPYKS AYVAAKHGVV GFTKVTALET AGKGITCNAI CPGYVLTPLV EAQIPDQMKA HDMDRETVIR EVMLQRQPSR QFATTAQIGG TVVFLCTAAA EQITGTTISV DGGWTAL
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