| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1504 |
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| Symbol | |
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| ID | 5084753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1538932 |
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| End bp | 1540125 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640483061 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001167703 |
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| Protein GI | 146277544 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0583737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA GGTCTGCCAT GCGGCGCTTG ATGACGATTG CCCTTCTTGC CGGTCTGCTG
CCCCAGGTGG TGCTTGCGCA GGAGACGGGG CCGAAGCCCG GACAGGCCGC GCAGGCGCTG
CCCGCGATCA CGGTCTCGAC GGTGGTGCGC CGGCCGATGC GCGACCGGGT CATCGCCTCG
GGGCTGATCG GCGCGGTGGA GCTGGTGCAG GTCCAGCCGC TGATCGAGGG CCAGCCGATC
GAGGCGCTCG AGGCGGATGT GGGCGACATG GTGGCCGAGG GGCAGGTGCT GGCACGGCTG
TCGGTCTCGA CGCTGGAGCT GCAGAAGAGC CAGTTCACCG CCTCGCTGGC CTCGGCACGG
GCCACGATCG CGCAGGCCGA GGCGCAGGTG CTGGAAGCGC AGTCCTCGGC CGACGAGGCC
GAGCGGGTGA ACCGCCGGAC GGCGCAGCTG CGCGAGCAGG GAGCCGCCTC GCAGGCGGCC
GCCGACACGG CGCAGGCCTC CTCCGTCTCG GCCAATGCGC GGGTGATGGT GGCCCGCCAG
ACGCTCGAGG CGGCCCGCGC GCAGGTGGCG CTGGCCGAGG CGCAGCTGGC CAATGTCGAG
CTGCAGCTGA AGCGCACCTC GGTCGTGGCG CCGGTGGCGG GAGAGATCGT CTCGCGCAAT
GCCAAGGTGG GCGCCATCGC CTCGGCGCAG GGCGAGCCCA TGTTCACGCT GCTGCGCGAC
GGGCGGCTTG AGCTTTTCGC CGATGTGGCC GAGCAGGATC TGCTGCGGCT CCGGCCGGGG
CAGTCGGTCA AGATCCGCAC GCTGGGCGCG GCCGAGCCGA TCCCCGGCTC GGTCCGGCTG
GTGGAGCCTG CCATCGACAC GGCGACGCGC CTCGGGCGGG CCCGGATCGC CATCGACCGG
ATCGAGGCGG TGCGCTCGGG CATGTTCGCC GAGGCCGAGA TCCTCGTGAC CGAGCGCGAG
TCGCTGGCGG TGCCGGTCAC GGCGGTCAGC GGCGGGGCCG AGGGCGCGAC AGTGCTGCGC
GTCCGTCAGG GCGGCACGGT CGAGCGGACC CCGATCGTGA CCGGCATCCG CGACGGCGGC
ATGGTCGAGG TCGTGGAAGG GCTCTTTTCC AACGATCTCG TGGTGACGAA GGCCGGCGCC
TTCGTCCGTC CCGGCGACCG GGTGAACCCG GTTCCGGCGG AACCCGTGAA CTGA
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| Protein sequence | MSERSAMRRL MTIALLAGLL PQVVLAQETG PKPGQAAQAL PAITVSTVVR RPMRDRVIAS
GLIGAVELVQ VQPLIEGQPI EALEADVGDM VAEGQVLARL SVSTLELQKS QFTASLASAR
ATIAQAEAQV LEAQSSADEA ERVNRRTAQL REQGAASQAA ADTAQASSVS ANARVMVARQ
TLEAARAQVA LAEAQLANVE LQLKRTSVVA PVAGEIVSRN AKVGAIASAQ GEPMFTLLRD
GRLELFADVA EQDLLRLRPG QSVKIRTLGA AEPIPGSVRL VEPAIDTATR LGRARIAIDR
IEAVRSGMFA EAEILVTERE SLAVPVTAVS GGAEGATVLR VRQGGTVERT PIVTGIRDGG
MVEVVEGLFS NDLVVTKAGA FVRPGDRVNP VPAEPVN
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