Gene Rsph17025_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1496 
Symbol 
ID5084745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1529410 
End bp1530276 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID640483053 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_001167695 
Protein GI146277536 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.223797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC TGGCATTTCT GGGACTGGGG GTCATGGGCT TCCCGATGGC GGGGCATCTG 
GCCGCCAAGG GGCACGAGGT GACGGTCTAC AACCGCAGCG GCGCCAAGGC CGAGGCCTGG
GTGTCCCGGC ACGGCGGACG CTCGACGCCC ACGCCGGCCG AGGCGGCGGC GGGCGCCGAG
TTCGTGATGG CCTGCGTGGG CAATGACGAC GACCTGCGCG CGATCTGCCG GGGCGAGACG
GGCGCCTTCG CGGGCATGGA GAGGGGCGCG ATCTTCGTCG ATCACACCAC CGTTTCGGCG
CAGGTCACGC GCGAGCTGGC GGCCGAGGCG GACGGGCTTG GCCTGGGCTT CGTCGATGCG
CCGGTGTCGG GCGGGCAGGC CGGGGCCGAA AACGGGGCGC TCTCGATCAT GTGCGGCGGC
TCGGAGGCGC ATTATGCACG GGCCGAGCCG GTGATGGAGG CCTATGCCCG CGTCTGCCGC
AGGCTGGGCG AGAGCGGCTC GGGGCAGGTC GCCAAGATGA TGAACCAGAT CTGCATTGCG
GGGCTGGTGC AGGGGCTGGC CGAGGCGCTG GCCTTCGGCC AGAAGGCCGG CATGGACGGC
AAGGCCGTGG TCGAGGTCAT CAGCCAGGGG GCGGCCGGAA GCTGGCAGAT GGCGAACCGC
CATGCGACCA TGCTCGAGGA CCGGTTCGAC TTCGGCTTCG CCGTGGACTG GATGCGCAAG
GATCTGGGGA TCTGTCTGCG GACCGCCGAC GAGGTGGGGG CGAGCCTGCC CGTCACGGCC
CTCGTCGACC AGTTCTACAA GGAGGTTCAG CAGATGGGCG GCGGCCGCTG GGACACGTCC
GCGCTCATCA AGCGCCTGAC CCGCTGA
 
Protein sequence
MAKLAFLGLG VMGFPMAGHL AAKGHEVTVY NRSGAKAEAW VSRHGGRSTP TPAEAAAGAE 
FVMACVGNDD DLRAICRGET GAFAGMERGA IFVDHTTVSA QVTRELAAEA DGLGLGFVDA
PVSGGQAGAE NGALSIMCGG SEAHYARAEP VMEAYARVCR RLGESGSGQV AKMMNQICIA
GLVQGLAEAL AFGQKAGMDG KAVVEVISQG AAGSWQMANR HATMLEDRFD FGFAVDWMRK
DLGICLRTAD EVGASLPVTA LVDQFYKEVQ QMGGGRWDTS ALIKRLTR