| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1486 |
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| Symbol | |
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| ID | 5083947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1514902 |
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| End bp | 1515882 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640483043 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001167685 |
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| Protein GI | 146277526 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.776199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCCTTC GCATCGCTCA GCTTCCGGTG GATCCGCCGG TGCTCCTCGC GCCGATGGCG
GGAATAACGG ATCTTCCCTT TCGGCGGCTG GCCGTGCGCT TCGGCGCGGG GCTCGTCGTG
TCCGAGATGG TGGCCAGCCG CGAGATGGTT TGCGCGGGCA CCGAGGCGCG GGCGCGGGCC
GAGATCGGCG CGGCCGAGGG CCGGACGGCG GTGCAGCTGG CGGGCTGCGA TCCGCACTGG
ATGGCCGAGG CCGCGCGGCT GGTCGAGGCG CAGGGCGCGC GGATCATCGA CATCAACATG
GGCTGCCCGG CCAAACGGGT CACGAACGGC TGGTCGGGCT CGGCGCTGAT GCGCGAGCCG
GACCGGGCGC TCGCGCTGGT CGAGGCGGTG GTGGCGGCGG TGACGGTGCC GGTCACGCTC
AAGATGCGGC TCGGCTGGGA CGAGGGGATG CTGAACGCGC CCGAGATCGC GCGCCGGGCC
GAAGCCGCGG GCGTGGCGAT GATCACGATC CACGGCCGCA CGCGCTGCCA GTTCTACACC
GGCCGCGCCG ACTGGGCGGC GATCCGCCCG GTGGTCGAGG CGGTCTCGGT GCCGGTGGTG
GCCAACGGCG ACATCACCGG GCCGGGGGAG GCGCGGGCGG CGCTCGAGGC CTCGGAGGCG
GCGGGGGTCA TGGTCGGGCG CGGGGCGCAG GGCCGTCCGT GGCTGCTCGG CCGCATTGGG
GCCGCGCTCG AGGGCCGGGC GCTGCCCGAT GCGCCCTTCG GGGCCGCGCT CGCCGATCTG
GTCGTGTCCC ATTACGAGGA GATGCTCTCC TTCTACGGCC GTGACCTCGG GCTGCGCGTC
GCGCGCAAGC ATCTGAACTG GTATCTCGAG GCCGCGGGCC TCGCCGCGCA CCGCGGCCCC
ATCGTGACCG GCACCGACCC GGCGCAGGTG GTCCGGCTGC TGCGGCAGGC CTTCGGCGCG
CAGGAAAGGG TCGCCGCATG A
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| Protein sequence | MALRIAQLPV DPPVLLAPMA GITDLPFRRL AVRFGAGLVV SEMVASREMV CAGTEARARA
EIGAAEGRTA VQLAGCDPHW MAEAARLVEA QGARIIDINM GCPAKRVTNG WSGSALMREP
DRALALVEAV VAAVTVPVTL KMRLGWDEGM LNAPEIARRA EAAGVAMITI HGRTRCQFYT
GRADWAAIRP VVEAVSVPVV ANGDITGPGE ARAALEASEA AGVMVGRGAQ GRPWLLGRIG
AALEGRALPD APFGAALADL VVSHYEEMLS FYGRDLGLRV ARKHLNWYLE AAGLAAHRGP
IVTGTDPAQV VRLLRQAFGA QERVAA
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