Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1443 |
Symbol | |
ID | 5082328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1475577 |
End bp | 1476113 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640482999 |
Product | Allergen V5/Tpx-1 family protein |
Protein accession | YP_001167642 |
Protein GI | 146277483 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.477266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCGC CTCGAAGATT GCAACCGGAA CGTGCAATAC GCCCAGACCA CAACGAACAG ATGAGTCCCA TGCGCACAAT CCTCGCAAGC CTCCTGCTGC TGATCGCGGC CCCGCTTCAC GCCCAGCCCT GCGCCGCCCC GCAGGGGGCC GATCAGGCCC GGAGCGAGGT GATCCGCCTC GTGAGCGCGG AACGGCGCCA GAAGGGCCTG CCGCCGCTCG ATTTCTCGGC CAGGCTTCAG CGTGCGGCAC AGGTGCAGGC CTGCAGCAAT GCCCGCCGCT CGGTCCTGTC GCACGAGCTG CCCAACGGGG CGGGCCTCAC CGAGCGGCTG CGCTCGGAGG GCTACCGCTA CCGGACCGCC GCCGAGAACA TCGCCCGCGG CCCCTCCAGC GCGCAGCGGG TGGTGGAACT CTGGATGAAC TCCTCGGGGC ATCGGAAGAA CATCCTGATG CAGGGGGTGC GCGAGGCGGG CGTGGGGATC GCGCCGGGCA CGGACGGGCG GGCCCAGTGG TCGCTGGTGC TCGGCGCCCG GAGGTGA
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Protein sequence | MIAPRRLQPE RAIRPDHNEQ MSPMRTILAS LLLLIAAPLH AQPCAAPQGA DQARSEVIRL VSAERRQKGL PPLDFSARLQ RAAQVQACSN ARRSVLSHEL PNGAGLTERL RSEGYRYRTA AENIARGPSS AQRVVELWMN SSGHRKNILM QGVREAGVGI APGTDGRAQW SLVLGARR
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