Gene Rsph17025_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1400 
Symbol 
ID5083074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1428508 
End bp1429701 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content71% 
IMG OID640482958 
Productcytochrome B561 
Protein accessionYP_001167602 
Protein GI146277443 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein
[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.687205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCG GCAACACACC CCGCAGCTAC GGAACGGTTG AGCGCACCTT CCACTGGCTG 
ATGGCGCTCA TGATCCTGAG CGTCGCGCCC CTCGGCATTC TGGCCGAAGG GCTTCCCCAT
GACACAGCCG AGGCGGTGGC GCGAAAGGCG CTGCTCTTCT CGCTGCACAA GACCCTCGGG
GTCACGATCT TCCTGCTGGC GCTGGCCCGT CTTGTCTGGG TCGCGATCCA GCCGCGGCCC
GCGCCGCTTC ATCCCGAGCG GCGGCTCGAG ACGGCACTGG CGGGTTGGGT GCACGGGTTC
CTCTATCTCT CGCTGGTGCT GGTGCCCCTC GCGGGGTGGG TGGAGCATGC CGCGACCGAC
GGCTTCGCGC CGATCCTCTG GCCGTTCGGG CAATCGCTGC CGCTGGTGCC CAAGTCGCCC
GCCGTGGCCG AGGTGGCCGC CACGCTGCAT GTGACCTTCG CATGGGGCCT GATCGGGGCC
ATCGGGCTCC ATCTGGCGGG CGTCGTCAAA CATGCGCTGG TGGACCGAGA CGCGACGCTC
GCGCGGATGG TCCGCGGCGT CGAGGGAGGG CGGGGGCAGG CTGCCCGCCA CCGGGGCCCG
GCCCTTGCCG CGCTTGCCGT CTATGCGGTC GCTGCGGGCG CCGCGCTGGC CCTGATGCCC
TCCGACAGGC CCGCTTCGCC GCCGAGGCTG GCCGAAGTCG CATCGGATTG GGTGGTCGAG
GAGGGGGCTC TGACCTTCAC GGTGCGCCAG ATGGGCAGCG AGGTCACCGG CTCCTTTGGC
GAGTGGACCG CCGCCATCCG CTTCGAGCAG GAGCCGGTTG CGGGACGGAA CGGCGATGTC
CGGGTGACGA TCGCGATGCC GAGCGTGACC ATCGGCTCGG TGACCAGCCA GGCGCAGGAG
GAGGAGTTCT TCAACGTGGC CGGCCATCCC GAGGCCGTCT TCGCCGCCGA CATCCTGCCG
GAGGGCGCTG GCCATGTCGC GCGGGGCGTG CTCGATCTGC GGGGGGTCGA GGTGCCGGTC
GATCTGCCCT TTGACCTCGA GATCGACGGC GAGACGGCGC GGATGAAGGG CTCGGTCACG
TTGGACCGTC GCGACTTTGC GATCGGACAG AGCTACGCGG ACGAAGCGAC CGTCGGCCAT
GACGTGCGCG TTGATGTGGC GCTGACGGCG CGGCGCGCAG CCGCGGTGGA GTGA
 
Protein sequence
MALGNTPRSY GTVERTFHWL MALMILSVAP LGILAEGLPH DTAEAVARKA LLFSLHKTLG 
VTIFLLALAR LVWVAIQPRP APLHPERRLE TALAGWVHGF LYLSLVLVPL AGWVEHAATD
GFAPILWPFG QSLPLVPKSP AVAEVAATLH VTFAWGLIGA IGLHLAGVVK HALVDRDATL
ARMVRGVEGG RGQAARHRGP ALAALAVYAV AAGAALALMP SDRPASPPRL AEVASDWVVE
EGALTFTVRQ MGSEVTGSFG EWTAAIRFEQ EPVAGRNGDV RVTIAMPSVT IGSVTSQAQE
EEFFNVAGHP EAVFAADILP EGAGHVARGV LDLRGVEVPV DLPFDLEIDG ETARMKGSVT
LDRRDFAIGQ SYADEATVGH DVRVDVALTA RRAAAVE