Gene Rsph17025_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1388 
Symbol 
ID5083062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1417058 
End bp1418029 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID640482946 
Producthypothetical protein 
Protein accessionYP_001167590 
Protein GI146277431 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.19024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.830228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT TGCTGGCCTT GCTGGACGAT GTGGCCTCGA TCGCCAAGGT CGCCGCGGCA 
TCGGTGGACG ATGTGATCGG GCAGGCCGCC AAGGCGGGTG CCAAGGCCGC GGGCGCCGTC
ATCGACGATG CGGCCGTGAC GCCGAAATAT GTGCAGGGCT TCGACGCCTC CCGCGAGATC
CCGATCGTGT GGCGCATCGC CAAGGGCTCG TTCTTCAACA AGCTGGTCAT CCTGTTGCCC
GCGGCGCTCC TGCTGTCGGC CTTCGCGCCC TGGGCGATCC CGCCGCTGCT GATGCTCGGC
GGCGCCTACC TCTGTTTTGA AGGGGCCGAG AAGGTGGCCC ATCTGTTCGG CGGCCACCAC
GAGGCGGACG AGGCGGCCTC GGGCGATCCC ACCCATCTCG AGGAGCAGAA GGTTGCGGGG
GCGATCAAGA CCGACTTCAT CCTCTCGGCC GAGATCATGA CCATCGTGCT GGCGGCCCTG
CCGCCGGGCG GGATTGTCAT GAAGGCGGCC TCGCTGGCTG CGGCGGGCTC CGGCATCACG
GTGCTGGTCT ATGGCGGGGT CGCGGCCATC GTGAAGGCCG ATGACCTGGG CGTGCTGATG
AGCCTGCGCG GCCGGCTTGC CGTGACGCGC GCCCTCGGGC GCGGGATCGT GCACGGCATG
CCGCGCTTCC TGAAGCTTCT GGCCGCGGTC GGCACGGCCG CGATGATCTG GGTCGGCGGG
GCCATCGTGA TCCACGGGCT CTACGAGCTG GGTTGGGGCT GGCTGCACCA CCACATCCAC
GACATTGCGG TGGCCGTGGC CGCACGGGTT CCACAGGCGC CGGGCCTGGT GGAATGGATC
GTCACGGCCT TCTTCGACGG GCTTTTCGGG CTGGCCCTCG GCCTCGCGCT GATTCCGGTG
GCAACCCGGA TCATCGCGCC CGCCTGGAGG CTCGTCGCCC GCCTCCGGCC CCGAGCCACG
CCGCACCGGT AG
 
Protein sequence
MSGLLALLDD VASIAKVAAA SVDDVIGQAA KAGAKAAGAV IDDAAVTPKY VQGFDASREI 
PIVWRIAKGS FFNKLVILLP AALLLSAFAP WAIPPLLMLG GAYLCFEGAE KVAHLFGGHH
EADEAASGDP THLEEQKVAG AIKTDFILSA EIMTIVLAAL PPGGIVMKAA SLAAAGSGIT
VLVYGGVAAI VKADDLGVLM SLRGRLAVTR ALGRGIVHGM PRFLKLLAAV GTAAMIWVGG
AIVIHGLYEL GWGWLHHHIH DIAVAVAARV PQAPGLVEWI VTAFFDGLFG LALGLALIPV
ATRIIAPAWR LVARLRPRAT PHR