| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1382 |
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| Symbol | |
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| ID | 5083056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1410446 |
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| End bp | 1412413 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640482940 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001167584 |
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| Protein GI | 146277425 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00890122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0713693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CAGCCGTTTC CCTTCTGGCA CTGCTGGCCG CCGGCCCGCT GCCGCTTCTG
GCGCAGGATA TCGCGCTGGA CGAGATCGTG GTCTCCGCGA ACCTCGGTGA GACCGAGGCG
AGCCGCACGG GCGCGACGGT CGAGGTTGTC ACGACCGAGG ATCTGCGCTC GACCGGCGAC
CTGCGCTTTT CCGACGTGCT GCGCCGCCTG CCCGGGGTCA GCGTGAACAC CCGTGGCGGC
ATGGGCAACC AGACCGGCAT AGCGATTCGC GGCGCCTCGC AGAACTATGT CGGCGTGCTG
GTGGACGGGA TCGATGTGAC CGATCCCACC GCCACGCAGG TCGCCTTCGA CTTCGGCCAG
CTGACCACCA GCGATGTCTC GCGCGTCGAG GTGCTCAAGG GCAGCCAGTC GGCGCTCTAT
GGCTCGGGCG CGGTGGGCGG CGTCGTCACG ATCACCACGC TGCGTCCGAC CGAGGAGGGC
ACGCACCAGT CCGTCTCGGC CGAGATCGGC AGCCACCGCA CGGCGGCGCT GTCCTACGGC
ATCACCCATC TCTCGGACAA TTCGGAAGCC GCGCTGACGC TGTCGCATGT CGAAACCGAC
GGCTTCTCGA ACGCGAGCGA AAGCGATGGC AACACCGAGG CCGACGGATA CGAGATGGAC
CGCCTGTCGT TCCACGTCGC CCGCACGCTG CAGAACGGGG TGCGGATCGG CCTCAACGGT
TTCACCGAGA AAAGCGAGAG CGAGTACGAC CCGGCTTATT ATCTGCCGTC TTCGTTCCTG
GGCCTGCGTC TGACCTTTGA CGAGATCCTC GCGTCCGAGG TGCGACTGGG CGACGGCGAA
AGCTACGACG AACGCCTCGA CCGAAGCTCG ACCGGCCTTC GTGCCTTCGC GGAGTTCGAC
ACCGGGCCGG TGAGTCACTC GGTCAGCGTC ACCGATTTCC GCACCGAACG CACCTATTTC
GAGAACGAGG TCGGACCCGA TTACCTCGAC TACGACATCG CGACAGGCAC CTATGGCACC
AAGATCGTCC GGACAGAGAA CACCTACAAG GGCCGGCGGA CCGGCGTGAA CTGGCAAGGC
GGCTTCGATC TTGCCGGCGG GCGGATGATC CTTGGTGCCG ACTGGAAGAA CGAGGACTTC
GATCAGCGTG GCGACTGGGA TGATCTCTCA GCTGACAGCT CGACCACCGG GGTTCTCGGC
GAATTCACCC GCAGCCTTGG CGATCTCGAC CTGGCGCTGT CGCTTCGGCA CGAGGATCAC
TCGACCTTTG GCGGCTTCGA CTCGGGCCGC TTCGCGCTGG CCTACCGACT GGATGAGGCG
ACGATCCTGC GGGCTCAGGC CGGCACCGGC TACCGCGCGC CATCGAACTA CGAGCTGTTC
AGCGACTTTG GGTCGGCCGA TCTCGACCCC GAGCAAAGCC GGAACGTTGA TCTCGGGATC
GAGCATGCGT TCGCCGAAGG GACATCGCTT CGCGCCACCG CCTTCTACCT CGAGGTCGAC
GAACTGATCG ACTTTAATCC GAACGCCATG GGCTGCGCCG CCGGTCGGGG CTGCTACAGC
CAAGTTCCGG GCACGTCACG CCGCAGTGGT CTGGAACTGT CTGGCGAACT GGCACTGACC
GACAGGCTGG GCTTGGCCGC AGCTTATACT TACACCGACA GCGCAACCAA CGCCGCGACG
ACCTGGGCCA GCGTGCCGCG CCATCTGGTG GCGGTCGAGC TGACGTCGGA CCTGACACCC
ACCCTGCATG GCCGGATCGG CCTGACCGCG GCGATGGACC GTCCCGACGA CTTCGGCACT
CCGGTCGAGA ACTACAGCCT GGTCGATGCC ACGCTCACCA AGGGTCTCGG CGAGGGGCGC
GAGGCCTATC TGCGGGTGGA AAACCTGTTT GACGAAGAGT ATGAACTGGT TCCGGGCTAC
GGAACCTCGG GGAGGGCTGT CTTTGCGGGG CTGCGTGCGC GCTTCTAG
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| Protein sequence | MKKTAVSLLA LLAAGPLPLL AQDIALDEIV VSANLGETEA SRTGATVEVV TTEDLRSTGD
LRFSDVLRRL PGVSVNTRGG MGNQTGIAIR GASQNYVGVL VDGIDVTDPT ATQVAFDFGQ
LTTSDVSRVE VLKGSQSALY GSGAVGGVVT ITTLRPTEEG THQSVSAEIG SHRTAALSYG
ITHLSDNSEA ALTLSHVETD GFSNASESDG NTEADGYEMD RLSFHVARTL QNGVRIGLNG
FTEKSESEYD PAYYLPSSFL GLRLTFDEIL ASEVRLGDGE SYDERLDRSS TGLRAFAEFD
TGPVSHSVSV TDFRTERTYF ENEVGPDYLD YDIATGTYGT KIVRTENTYK GRRTGVNWQG
GFDLAGGRMI LGADWKNEDF DQRGDWDDLS ADSSTTGVLG EFTRSLGDLD LALSLRHEDH
STFGGFDSGR FALAYRLDEA TILRAQAGTG YRAPSNYELF SDFGSADLDP EQSRNVDLGI
EHAFAEGTSL RATAFYLEVD ELIDFNPNAM GCAAGRGCYS QVPGTSRRSG LELSGELALT
DRLGLAAAYT YTDSATNAAT TWASVPRHLV AVELTSDLTP TLHGRIGLTA AMDRPDDFGT
PVENYSLVDA TLTKGLGEGR EAYLRVENLF DEEYELVPGY GTSGRAVFAG LRARF
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