Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1381 |
Symbol | |
ID | 5083055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1408965 |
End bp | 1409852 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482939 |
Product | ABC transporter related |
Protein accession | YP_001167583 |
Protein GI | 146277424 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.044144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0317501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGCAC CCACAGCCGT CGAAGCGCGC AATGTCGTCA AGGCCTTCGG GCAGGGAGAG GTGGCCGTTC GCGCATTGGA CGATGTGTCG GTCGGGATCC GCAGGGGCGA GTTCTTCACC CTGCTGGGCC CCTCGGGCTG CGGCAAGACC ACGCTTCTGC GCCTGATCGC GGGCTTCGAG GCGCCCACCT CGGGCACGAT CCTGCTCGAC GGGCGCGACA TCACGGCCGA TCCGCCGAAC CGCCGCCCGA TCAACACCGT CTTCCAGAGC TACGCGCTCT TTCCGCACCT GACGGTGGCC GAGAACGTGG GCTTCGGGCT CAGGATGCAG GGCAAGCCGC GGGCCGAGAT CGGGAATGTC ACCGCGCGGA TGCTGGCGCT CGTGCGGCTC GAGGCGCTGG CGGGGCGGAG GGTGGCGCAA CTGTCGGGCG GGCAGCAGCA GCGCGTGGCG CTGGCACGCG CGCTGGCGCC GCAGCCGCGG GTGCTGCTGC TGGACGAGCC GCTCTCGGCG CTCGATCTCA AGCTGCGCAA GGAGATGCAG ATCGAGCTGA AGCGGCTCCA GCACGAGACG GGCATCACCT TCGTCTTCGT GACCCACGAT CAGGAGGAGG CGCTGACCAT GTCGGACCGG ATCGGGGTGA TGAGTGCGGG CCGGATCCTC CAGATCGGCC CCCCGCGCGA GATCTACACG CGGCGAAGGA CGGGTGACGG TCGCCGTGCG CCCCGAACAG GTGCGTCTCG TGCCGCCGGA CGAGCCGGGC GCCCTGCGCG CCACGATCCG CAATCTGGTC TATTTCGGCA CCGACACCCA TTGCCACCTT GCGCTGGCCG ACGGAACCGA GGTGGTGGCG CGGCTGCAGA GCAGCGCCTC GGACGATCCG GGGCTTGA
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Protein sequence | MTAPTAVEAR NVVKAFGQGE VAVRALDDVS VGIRRGEFFT LLGPSGCGKT TLLRLIAGFE APTSGTILLD GRDITADPPN RRPINTVFQS YALFPHLTVA ENVGFGLRMQ GKPRAEIGNV TARMLALVRL EALAGRRVAQ LSGGQQQRVA LARALAPQPR VLLLDEPLSA LDLKLRKEMQ IELKRLQHET GITFVFVTHD QEEALTMSDR IGVMSAGRIL QIGPPREIYT RRRTGDGRRA PRTGASRAAG RAGRPARHDP QSGLFRHRHP LPPCAGRRNR GGGAAAEQRL GRSGA
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