Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1380 |
Symbol | |
ID | 5083054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1408012 |
End bp | 1408902 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640482938 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001167582 |
Protein GI | 146277423 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0764825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0907135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCC GCGACAGCGC GCGCAGCGGC TGGCTCCTTT CGGCGCCCGC GCTTGCGATC CTCTTCCTCG CGGCCTCAGG GCCTCTTCTG GTGGTGCTGA TCTACAGCTT CCTCGTGAAG GGCCAGTATG GCGGCGTGAT CTGGGAGTTC TCGTCCGAGG CCTGGTTCGA GGTGTTCTTC ACCCGCGACA TCTTCTCGGA TGAGGTCAGC CTTGCGGACG CCCATCTCGC GATCTTCTGG CGCTCGGTGA AGCTGTCCTT GATGACGACG GCCATCACCT TCGCCGTGGG CTTTCCGACC GCCTGGTTCA TCGCGACGCG CCCGCCAAAC CGGCGGGCGC TCTGGCTCTT CCTCATCACC ATTCCGTTTT GGACCAACCT GCTGATCCGC ACCTTCGCCA TCAACGAGGT GATCCGCAAC GAGGGCATCC TGAACACGCT GCTGATCCGC GCGGGCCTGA TCGGGCGACC GATCCAGATC CTCTACACCG ACACGGCGGT GCTGATCGGC ATGACCTACG TCTATCTGCC GCTGATGGTG CTGCCGCTTT TCGCCGCGAT CGACCGGTTT GACATGCGGC TGCTGGAGGC GGCCTACGAC CTCTATGCCA GCCGCTGGCA GGTGCTGCGC CGGATCATCC TGCCGCTGGT CAGGCCCGGC ATCGTCGCGG GCTCGATCCT GGTCTTCGTG CCCTCGCTCG GCGCCTATGT CACGCCGCGG GTGCTGGGCG GCGGCAAGAA CATGATGATC GGCAACTTCA TCGAGCTGCA GTTCGGGCAG GGCCGCAACT GGCCGCTGGG GGCCGCGCTC TCGATGCTGC TGCTGGCCAT CGTGATGGTG GCGCTTCTGA TCTATGTCCG CGCCGCAAGC CGGGAGAGCG GCCATGGGTA G
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Protein sequence | MARRDSARSG WLLSAPALAI LFLAASGPLL VVLIYSFLVK GQYGGVIWEF SSEAWFEVFF TRDIFSDEVS LADAHLAIFW RSVKLSLMTT AITFAVGFPT AWFIATRPPN RRALWLFLIT IPFWTNLLIR TFAINEVIRN EGILNTLLIR AGLIGRPIQI LYTDTAVLIG MTYVYLPLMV LPLFAAIDRF DMRLLEAAYD LYASRWQVLR RIILPLVRPG IVAGSILVFV PSLGAYVTPR VLGGGKNMMI GNFIELQFGQ GRNWPLGAAL SMLLLAIVMV ALLIYVRAAS RESGHG
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