| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1378 |
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| Symbol | |
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| ID | 5083052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1406172 |
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| End bp | 1407191 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640482936 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001167580 |
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| Protein GI | 146277421 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.303939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.180418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATC TCGCAGCCAC AGCCCTGCTC CTCGCATCGA CCGGCCTCGC GGGGGCGGCC
GAGTTGAACC TCTACAACTG GGGCAACTAC ACGAGCGCCG AGTTGCTGGC GAAGTTCGAG
CAGGAGACCG GCATCAAGGT CACGGTGACC GACTACGACA GCAACGACAC GGCGCTGGCC
AAGATCGAGG CGGGCGGGCA CGGGTTCGAC CTCGTGGTGC CCTCGGCCAA CTATGTGGGC
ATCTTCCGCG ACAAGGGCCT CCTGACCGAG CTGGACCTGT CGAGGATCCC GAACCACGCC
AACATCGCCC CCGAATGGAA GGATGTGGAG TGGGATCCGG GCCGCACCCA TACGGTGCCA
TGGCAGTGGG GCACCACCGC GATCTCGGTC AATACCGCCG TTTACAAGGG CGACATCAAC
ACGTCGGCGG TCTGGCTCGA GGTGCCGGAC GAGCTGAAGG GCAAGGTCAA TGTCGTGCCC
GAGATGAACG ATGTGGTGGC GCTGGCCACG ATGTATGCCG GCGGCGAGCC CTGCACCGAG
GATCTCGAGG TGCTCAAGAA GGCGCGCGAC CTGCTGCTTG CCGCCAAGCC GCACTGGATC
TCCATGGATT ACGGCGCCAC CGAAAAGCTC TCGAACAACG ACTGGGCGGC CTCGGTGAAC
TGGTCCGGCT CGTCGATGCG CGCGCGGCTC GCCAATCCCG AGGTGGCCTA TGGCTATCCC
CGGGAGGGCT TCATCACCTT CATGGACTCG GTGGCGCTGC TGCGCGATGC CCGCAATGTC
GAAGAGGCCT ACCAGTTCCT GAACTTCATC CTCGAGCCGG AGAATGCGGC GCTGATCTCG
GCCTTTGCGC GCTATTCGCC CGGTGTCAGC GGGGCCGAAG AGTTCCTGCC CGAGGACATG
AAGACGGCGC CCGAAGTGGT GATCACGGCC GAGTTCGCCG ACAAGGGCGT GTTCCTGCCG
GCCTGCGGGC CGAAGGCGCA GGAATACATC ACCGCGATCT GGACCGAGCT TCAGAAATAG
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| Protein sequence | MTHLAATALL LASTGLAGAA ELNLYNWGNY TSAELLAKFE QETGIKVTVT DYDSNDTALA
KIEAGGHGFD LVVPSANYVG IFRDKGLLTE LDLSRIPNHA NIAPEWKDVE WDPGRTHTVP
WQWGTTAISV NTAVYKGDIN TSAVWLEVPD ELKGKVNVVP EMNDVVALAT MYAGGEPCTE
DLEVLKKARD LLLAAKPHWI SMDYGATEKL SNNDWAASVN WSGSSMRARL ANPEVAYGYP
REGFITFMDS VALLRDARNV EEAYQFLNFI LEPENAALIS AFARYSPGVS GAEEFLPEDM
KTAPEVVITA EFADKGVFLP ACGPKAQEYI TAIWTELQK
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