Gene Rsph17025_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1358 
Symbol 
ID5083129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1390606 
End bp1391121 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content69% 
IMG OID640482915 
ProductHK97 family phage prohead protease 
Protein accessionYP_001167560 
Protein GI146277401 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.272379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCG TCTGTCGGGC CTTCATGGAG ACGAATGTGC AGGCCGATGC TGCGGGGGCC 
ATCTCGGGTG TTGCCTGGAA GTTCGCCACG CCCGATCGCA TTGGTGACAT GATCGAGAAG
GGGGCGTTCT CTGGCGCGGT GCTGCCGATC CCGATGCTCT TCGGCCATGA CATGAACGAC
CCCATCGGGG TCTGGGAAGC CGCCGTCGAG AAGGCGGACG GGCTGCACCT GTCCGGCAAG
CTGCTGGTGG ATGACGTGCC GCGGGCGCGG GAGGTCCGGG CGCTCGTCCA GGCGGGGGCC
GTGCGCGGCA TCTCCATCGG TTTCGTGGCC CGCAAGGCGG TCGCGCGGCC CGGTGGCGGC
CGGACCATCA AGGCCCTCGA ACTGGTCGAA GCCTCCCTGG TGGTGGTCCC GATGCATCCC
GGCGCGAGGG TGACCTCGGC CAAAGACGCG GTGAGCGCCC TGCGCCTCGC CGATGCACTC
CAACGCGCCA CGGCGCAGCT CGCAGCGAGG AAATGA
 
Protein sequence
MGIVCRAFME TNVQADAAGA ISGVAWKFAT PDRIGDMIEK GAFSGAVLPI PMLFGHDMND 
PIGVWEAAVE KADGLHLSGK LLVDDVPRAR EVRALVQAGA VRGISIGFVA RKAVARPGGG
RTIKALELVE ASLVVVPMHP GARVTSAKDA VSALRLADAL QRATAQLAAR K