| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1331 |
|---|
| Symbol | |
|---|
| ID | 5083288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1363693 |
|---|
| End bp | 1364730 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640482889 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001167535 |
|---|
| Protein GI | 146277376 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAA GCCTGGTTCC GGTCGTTGCG ACCGGTTGTG AAGATTTCAT GGCGCGCTTT
CGTCGCAGGA AGGTTGTTCT TGTGGCGGGC GGAGCCGGAT TTGTCGGTTC GCATCTTTGT
GAGACATTAA TTTCCGAAGG CCATTCGGTT GTCTGCCTGG ACAATCTCCA GACCGGCCGC
ATTCAGAATA TCTCCGCCCT GCAAGCTCAT CCGCAATTCC GGTTCATCGA GCAGGACATT
CTCGATCGCC TGAACTGGCA GGGGCCTCTG GACGAGATCT ACAACCTCGC CTGCCCGGCG
TCGCCGCCGC TCTACCAGCG TGACCCGATC CACACGTTCC GCACCTGCAC GGAAGGTGTG
CTGAACCTTC TGGGACTCGC CAAGGCGACA GGTGCGCGCA TCCTTCAGGC CTCGACCTCG
GAGGTCTATG GCGATCCCGA GATCACCTTG CAGCACGAAG GCTACCGGGG CTGCGTGAAC
ACGGTCGGAC CGCGTGCCTG TTACGACGAG GGCAAGCGCG CCGCCGAGAC CCTGTTCTGG
GAGTTCGGCA CCCACATGGG CGTCGAGGTG CGGATCGCGC GCATCTTCAA CACCTACGGA
CCGCGCATGA GCCCCGAGGA CGGGCGCGTG GTGTCGAACT TCATCGTGCA GGCGCTGACG
GGCGCGGACA TCACGATCTA TGGCGACGGG ATGCAGACCC GCTCCTTCTG CTATGTGGAT
GACCTCGTGG CCGGGCTGAA GGCGCTGATG GCCTCGGAAA CCAGCGACCC GGTGAACCTC
GGCAATCCCG GCGAGTTCAC GATGCGCGAA CTGGCCGACA TGGTGTTGCG CCAGACGGAC
TCGCGCTCGC GTCTGGTGCA GTGCCCGCTG CCGGTGGACG ATCCGCGCCA GCGCCGGCCC
GATATCTCGC GGGCCGCGGC GCGGCTGGGC TGGGCTCCGA CCGTCGCTCT CGAAGAGGGG
ATCGCCCGCA CGATCCGCCA TTTCGCCGGC GAGCTTCAGG TGTCCGACCC GTGCGAGGCG
CTGCTGCATC ATGTCTGA
|
|---|
| Protein sequence | MDGSLVPVVA TGCEDFMARF RRRKVVLVAG GAGFVGSHLC ETLISEGHSV VCLDNLQTGR
IQNISALQAH PQFRFIEQDI LDRLNWQGPL DEIYNLACPA SPPLYQRDPI HTFRTCTEGV
LNLLGLAKAT GARILQASTS EVYGDPEITL QHEGYRGCVN TVGPRACYDE GKRAAETLFW
EFGTHMGVEV RIARIFNTYG PRMSPEDGRV VSNFIVQALT GADITIYGDG MQTRSFCYVD
DLVAGLKALM ASETSDPVNL GNPGEFTMRE LADMVLRQTD SRSRLVQCPL PVDDPRQRRP
DISRAAARLG WAPTVALEEG IARTIRHFAG ELQVSDPCEA LLHHV
|
|---|
| |