| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1330 |
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| Symbol | |
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| ID | 5083287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1362036 |
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| End bp | 1363112 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640482888 |
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| Product | spermidine/putrescine-binding periplasmic protein-like protein |
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| Protein accession | YP_001167534 |
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| Protein GI | 146277375 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.839911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGAT TCATCCTTCT GACCACGATG CTCGGGGGCT TCGCCCTCCC CGCCGCGGCA
GACCAGATTG CCGTCCTCGG ATGGGGCGGG GCCTACACGA CGAGCCAGGT CGAGGCCTAC
CACAAGCCCT TTACGGCCAA GACGGGCGTG ACGGTGGTCT CGGTCGATAC CGACAACCCG
GCCACGCCGA TCAAGGCCCA GGTCGAATCC GGCAATGTGA CGACCGACGT GGCGAGCGTG
GAATATGCCG ACGCGGTGCG GCTCTGCGAC GAGGGGCTGC TCGAGGAGAT CGACCCTTCG
ATCCTGCTCG CGGCCCCTGA TGGCACGCCC GCGGAAGAGG ACTTCCTGCC CGGCTCGCTG
GCCGAGTGCT TCGTGGCGAC CGATGTGTTC TCGACCGTGC TGGCCTATGA CGCCTCGAAA
TTCGCCGAAG GCGCGGCGCC GGAGGCCCTC GCCGACTTCT TCGATCTGGA GCAGTTTCCC
GGCAAGCGCG GGATGCGCAA GTCGGCCAAG GTCAATCTCG AGATGGCCCT GATGGCCGAT
GGCGTGCCGG CCGCCGAGGT CTATGACCTG CTGCGGACCG ATGAGGGCGT CGAGCGTGCC
TTTGCCAAGC TTGACGCGAT CAAGAACCAG ATCGTCTGGT GGGAGGCCGG TGCCCAGCCC
CCGCAACTCC TCGCCGATGG GGAGGTCGCG ATGACGATCG CCTACAACGG CCGCATCTTC
AACGCCGCCA TCACCGAGAA CAAGCCGTTC AACATCGTGT GGGATGGCCA GGTCTATGAG
GTCGAGGGCT GGGTGATCCC GAAGGGCGCG CCGAACCTCG AGCTTGCCAA GGACTTCGTG
GCCTTCTCGA CCGGGGCCGA GCCGTTGGCC AAGGCCGCGG AGTGGATCAG CTACGGCCCG
CCGCGCAAGT CCTCGGCCCC GCTCGTCGGC ACCTTCATGG ATGGCAAGAC CGAGATGGCG
CCGCACCTGC CGACCAGCCC CGAGAACATG ACGAACGCGC TGGCCTCGGA CTACGAATTC
TGGGTGGACC ACGACACCGA GCTGAACGAG CGCTTCAACG CCTGGCTCGC CGGCTGA
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| Protein sequence | MKRFILLTTM LGGFALPAAA DQIAVLGWGG AYTTSQVEAY HKPFTAKTGV TVVSVDTDNP
ATPIKAQVES GNVTTDVASV EYADAVRLCD EGLLEEIDPS ILLAAPDGTP AEEDFLPGSL
AECFVATDVF STVLAYDASK FAEGAAPEAL ADFFDLEQFP GKRGMRKSAK VNLEMALMAD
GVPAAEVYDL LRTDEGVERA FAKLDAIKNQ IVWWEAGAQP PQLLADGEVA MTIAYNGRIF
NAAITENKPF NIVWDGQVYE VEGWVIPKGA PNLELAKDFV AFSTGAEPLA KAAEWISYGP
PRKSSAPLVG TFMDGKTEMA PHLPTSPENM TNALASDYEF WVDHDTELNE RFNAWLAG
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