| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1260 |
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| Symbol | |
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| ID | 5084433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1300110 |
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| End bp | 1301414 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640482818 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001167466 |
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| Protein GI | 146277307 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.285759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGA TGCAATTCCA GCGTCAGACG ACCCAGCTGG CCATGACCCA GCGGATGCAG
GAGTCGCTCC GCATCCTGCA GATGAGCAAC GCCGATCTCG GCGACTATCT CGCCGCGCAG
GCGCTGGAGA ATCCCTGCCT CGAGGTGCGC GTGCCCGAGG GGGCCTCGGT CGCACCGCCG
CTGCCCTCGC GCGGGATCCA GGCGGCGGTG GACCGCGATG CCTTCGCCAC CGTCGAAGGC
CAGCCGCCGA GCCTTCTGGC CCATGTCGAG GCGCAGATCG ATCTGGCCTT CTTCGACCCC
GGAGACCGGC GGATCGCGCT GGCCTTTGCC GAGGCGCTGG AGCCTTCGGG CTGGCTGGGC
GCGCCGGTGG CCGAGGTCGC CGCGGCGGCC GGGGTGGAGG AGGACGAGGC GCGGGTGATC
CTCGAACGGT TGCAGGCCTT CGAGCCCGCG GGCCTTTTCG CCCGCTCGCT GGCCGAGTGC
CTGGCCCTGC AACTGGCCGA TCTGGGTCTG CTGACGTGGG AGCTGCGGAC CATGCTCGAC
CATCTGCATC TGGTCGCCGA GGGCAAGCTG GCCGACCTCG CCCGCCGCTG CGACTGCGAG
ATCGAGCATG TGCGGGAGAA TCTCGCGCTG ATCCGCAGCC TCAAGCCCAA GCCCGGCGAG
GCCTTTGCGC AGGATCGGAC CCCCATTCAG CCGCCCGACG TGCGCGTGCT GCGCGGCGAG
GACGGGTGGG AGGTCGAGCT GACCCGCGCG CAGCTGCCGC GCATCACGGT GGCAGAGGCG
GGTTCCACCG GAGATGCGGC GGCCGATGCC TGGCTCACGC GGGCGCAGTC GCAGGCGCGC
TGGTTGATGC GCGCGGTCGA GCGGCGGCAG GCCACGCTCT TGCGCACGGC GGCCTGCCTC
GTGCGGCACC AGTCCGCCTT CCTCGAGCAG GGGCCGCGGG CGTTGAAGCC CCTGTCGATG
GAGGAGGTGG CCCTTGAACT CGAGCTGCAT CCCTCGACCA TCAGCCGTGC CACCGCCACC
CGCCTGATCG AGACGCCCCG CGGGCTGGTC CCGCTGCGCT CGTTCTTCAG CCGCTCGGTG
GCGTCGGACG GGCCGGCCGC GCCGCAGTCG CAGGATGCGC TGATGGCGCT GGTGGGCGAG
ATCGTCGCGC GCGAGGACCG CAGCCGGCCG CTCTCGGACG ATGCGATCGT CAAGCAGGCG
AAGCTGATGG GCGCCGTGCT GGCGCGCCGC ACGGTCACGA AATACCGCGA GGCGCTGGGG
ATCCCGTCGT CCTACGACCG CAAGCGCGCC GGGGCGGCCG CCTGA
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| Protein sequence | MDMMQFQRQT TQLAMTQRMQ ESLRILQMSN ADLGDYLAAQ ALENPCLEVR VPEGASVAPP
LPSRGIQAAV DRDAFATVEG QPPSLLAHVE AQIDLAFFDP GDRRIALAFA EALEPSGWLG
APVAEVAAAA GVEEDEARVI LERLQAFEPA GLFARSLAEC LALQLADLGL LTWELRTMLD
HLHLVAEGKL ADLARRCDCE IEHVRENLAL IRSLKPKPGE AFAQDRTPIQ PPDVRVLRGE
DGWEVELTRA QLPRITVAEA GSTGDAAADA WLTRAQSQAR WLMRAVERRQ ATLLRTAACL
VRHQSAFLEQ GPRALKPLSM EEVALELELH PSTISRATAT RLIETPRGLV PLRSFFSRSV
ASDGPAAPQS QDALMALVGE IVAREDRSRP LSDDAIVKQA KLMGAVLARR TVTKYREALG
IPSSYDRKRA GAAA
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