| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1240 |
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| Symbol | |
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| ID | 5084413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1280991 |
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| End bp | 1282739 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640482798 |
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| Product | transcriptional regulator NifA |
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| Protein accession | YP_001167446 |
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| Protein GI | 146277287 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0431383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTT CCGCGGAAGG TTCCGACGCA GCGGCCGAGC GCGGCGAGGA GTATCTCACC
CTCGACGCCC TGTGCGAGAT CGCCAAGCTT CTGACCGGCG CCAGCGACCC GATCGCCCAC
ATGCCCGCGG TCTTCGGCGT GCTCGCCTCG TTCATGGGGC TGAAGCACGG GGCGCTTGCG
CTGCTGCAGG AAGGGGCGCC GGGCGAATCG TCCCGCAACG CGCGCCACAT CAACCCCTAT
GTCGTCGCGG CGACCGCCAG CGGAGGGCCC GTGTCCGCGG ACTGCCGTGC CATCCCGGCG
CAGGCGGCGC GGCATGTCTT TCGCAACGGC GTCTCGCTCG TGTCCTGCGA CATCGTCGAT
GAGTTCGGGG CCGACGCCCT TCCGCCCGGC CTCGAGGACA AGTATCAGGC GCTGATCGCC
GTGCCGATCC GGGACCAGGC CAATTCGCCC TTCGTGCTGG GTGTGCTCTG TGCCTATCGC
GGCCTCCGGG ACAATGGCGC GCGGTTTCTC GACACCGATC TTCGGGTGCT GAACATGGTC
GCGGCCGTGC TCGAGCAGTC GATCCGCTTC CGCAGGCTGG TGGCGCGCGA TCGCGACCGG
ATCGTGCAGG AGGCGCGCGA GGCGATCCGC GCGGCGGCCG AAGCCACATC GGCCGCGCCC
GCCGAACTGC CGGCGGCCGA ACTGGATGGG GTGATCGGCT CCTCGGCCGC GATCCAGCGG
GTGATCGGCC AGATCCGCAA GGTCGCGGGC ACCCACACGC CCGTCCTGCT GCGGGGCGAG
AGCGGCACCG GCAAGGAGGT CTTCGCCCGC GCCCTCCACG CCCTGTCGGA CCGGCGCGAC
CGGCCCTTCA TCAAGGTCAA CTGCGCGGCG CTGAGCCAGT CGCTGCTGGA ATCCGAGCTG
TTCGGCCACG AGAAGGGCTC GTTCACCGGG GCGGTGCAGC AGAAGAAAGG CCGGTTCGAG
CTGGCCGACG GCGGCACGCT CTTTCTCGAC GAGATCGGCG AGATCAGCCT CGAATTCCAG
GCCAAGCTCC TGCGCATCCT GCAGGAGGGC GAGTTCGAGC GGGTGGGCGG CTCGCGCACG
CTGAAGGTGG ACGTGCGGCT TGTGACCGCC ACCAACAAGG ATCTGGAACG GGCGGTGGCC
AACGGCACCT TCCGCGCCGA CCTCTATTTC CGCATCTGCG TCGTGCCGAT CGTCCTGCCG
CCGCTGCGCG AGCGCAAGGA GGACATCGGG CCGCTGGCCC AAGGGCTGCT CGAGCGGTTC
AACAAGCGCA ACGGCATGAA GAAGCGGCTG CACCCCTCGG CGATCTCGGC GCTGGCCGAG
TGCAACTTTC CCGGCAACGT CCGCGAGCTG GAAAACTGCA TCGCCCGCGT GGCCGCCCTC
TCGCCCGAGT CGGTGATCCA CGCCGACGAT CTGGCCTGCC ACCACGACCA TTGCCTCTCG
GCCGATCTCT GGCGGCTGCA GACGGGCGGC GCCTCGCCGG TGGGCGGGCT CGCACAGGGG
CCGCTGGAAT TGCCGGTGCT GGGCAGCCGG CCGCCTACGC CCGCGGCGCC GGAAGGGGCC
GCCGCTCCGC CCGCGTCGCC CGCGCGGCCT GCACCGCTCG ACAGCGAGGC GGCCGAGCGC
GAGGCGTTGA TCGAGGCGAT GGAGCGCGCG GGATGGGTGC AGGCCAAGGC CGCCCGGCTG
CGCGGCATGA CCCCGCGCCA GATCGGCTAC GCGCTCAGGA AGCACAACAT CCGCGTCGAG
AAGTTCTGA
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| Protein sequence | MDISAEGSDA AAERGEEYLT LDALCEIAKL LTGASDPIAH MPAVFGVLAS FMGLKHGALA
LLQEGAPGES SRNARHINPY VVAATASGGP VSADCRAIPA QAARHVFRNG VSLVSCDIVD
EFGADALPPG LEDKYQALIA VPIRDQANSP FVLGVLCAYR GLRDNGARFL DTDLRVLNMV
AAVLEQSIRF RRLVARDRDR IVQEAREAIR AAAEATSAAP AELPAAELDG VIGSSAAIQR
VIGQIRKVAG THTPVLLRGE SGTGKEVFAR ALHALSDRRD RPFIKVNCAA LSQSLLESEL
FGHEKGSFTG AVQQKKGRFE LADGGTLFLD EIGEISLEFQ AKLLRILQEG EFERVGGSRT
LKVDVRLVTA TNKDLERAVA NGTFRADLYF RICVVPIVLP PLRERKEDIG PLAQGLLERF
NKRNGMKKRL HPSAISALAE CNFPGNVREL ENCIARVAAL SPESVIHADD LACHHDHCLS
ADLWRLQTGG ASPVGGLAQG PLELPVLGSR PPTPAAPEGA AAPPASPARP APLDSEAAER
EALIEAMERA GWVQAKAARL RGMTPRQIGY ALRKHNIRVE KF
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