Gene Rsph17025_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1234 
Symbol 
ID5084407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1276183 
End bp1276524 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content65% 
IMG OID640482792 
Productsmall multidrug resistance protein 
Protein accessionYP_001167440 
Protein GI146277281 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTG CGACCACCTA TGCCTTCCTT GTCTTCGCCA TCTTCGCCGA GGTCGTGGCC 
ACGACCGCGC TGGCGCGTTC GGACGGGTTC ACCCGGCTCT GGCCCAGCGT CATCACCGTC
CTCGGCTACA GCATCGCCTT TGCCTGCCTG TCGGTCACCC TGAAGGTGAT GCCGACCGGC
GTCGTCTATG CCCTCTGGTC CGGGTTGGGC ATCGTCTTCA TCGCGGCCAT CGGCTGGCTC
GTCTATGACG AGCGGCTGGA CCTGCCCGCC CTCATCGGGC TTGGGCTGAT CCTTGCGGGC
GTGCTGGTCG TGAACCTCTT CTCGAAGACC ATCCCGCACT AG
 
Protein sequence
MPLATTYAFL VFAIFAEVVA TTALARSDGF TRLWPSVITV LGYSIAFACL SVTLKVMPTG 
VVYALWSGLG IVFIAAIGWL VYDERLDLPA LIGLGLILAG VLVVNLFSKT IPH