Gene Rsph17025_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1232 
Symbol 
ID5084405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1274163 
End bp1275062 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content69% 
IMG OID640482790 
Productheat shock protein HtpX 
Protein accessionYP_001167438 
Protein GI146277279 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACG TTCGCACCGG CATCCTGATG GCGGTCATGA CGGCGCTGTT TCTTGGCGTC 
GGCGCCCTGA TCGGGGGGCA GAGCGGCGCG ATCATCGCCT TGATCGTGGC GGCGCTGATG
AACCTCTTCA CCTTCTGGAA CTCGGACAAG GCGGTGCTGT CCATGCACGG CGCCCATGAG
GTCGATCCCC GCGCCGCGCC CGATCTGCAC GCCATGGTGC GGGGGCTGGC CGAGCGGGCG
GGCATGCCGA TGCCGCGGCT CTACCTGATC GAGACCGACC AGCCCAACGC CTTCGCGACC
GGCCGCAACC CCGAGAACGC CGCGGTGGCG GTGACGCGCG GCCTGCTGCG GGCGCTTTCG
CCCGAGGAGG TTGCTGGGGT GGTCGCGCAT GAGCTGGCCC ATATCAAGAA CCGCGACACG
CTGCTGATGA CCGTCACCGC GACCTTCGCC GGGGCGATCT CGATGCTGGC CAACTTTGCC
TTCTTCTTCG GCGGCGGCTC CAATCAGGAG GGCGAGCGTC CCGTGGGGAT CGTGGGCACG
CTTGCGCTGA TGATCCTTGC GCCACTGGCG GCGGGCCTCG TGCAGATGGC GATCTCGCGA
TCGCGCGAAT ATGAGGCGGA CCGGATCGGG GCCGAGATCT GCGGCCGGCC GCTCTGGCTG
GCCTCGGCGC TCGGCAAGAT CGAGGGTCTG GCGCGGCGCA TCGACAACAC GCGCGCCGAG
CGCAACCCGG CGACGGCCCA CATGTTCATC ATCAACCCGC TTCATGCGAT GTCGCACGAC
CGGCTCTTTG CCACCCATCC GAACACCGCG AACCGCATCG CGGCCCTGCA GGCCATGGCG
GGGGCGGGTG TTGAGCGGTC CTCGATGCCG CGCGTCCCGC GCCGCGGTCC CTGGCGCTGA
 
Protein sequence
MGYVRTGILM AVMTALFLGV GALIGGQSGA IIALIVAALM NLFTFWNSDK AVLSMHGAHE 
VDPRAAPDLH AMVRGLAERA GMPMPRLYLI ETDQPNAFAT GRNPENAAVA VTRGLLRALS
PEEVAGVVAH ELAHIKNRDT LLMTVTATFA GAISMLANFA FFFGGGSNQE GERPVGIVGT
LALMILAPLA AGLVQMAISR SREYEADRIG AEICGRPLWL ASALGKIEGL ARRIDNTRAE
RNPATAHMFI INPLHAMSHD RLFATHPNTA NRIAALQAMA GAGVERSSMP RVPRRGPWR