Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1222 |
Symbol | xerC |
ID | 5084506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1265473 |
End bp | 1266393 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640482780 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_001167428 |
Protein GI | 146277269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.120622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGG CGATCCCGCC GGCGGCGCGC GACGCGCTCG AGGCGTGGCT CACCCACCAG CGGGTGATCG AGGGCGCCTC GCCCCACACC ATCCGGGCCT ATGCGGCGGA CGTCGCGGGC TGGCTCGCCT TTCTCGCCGG TCATCTGGGC GAAGGCTACG GTCTGCCGGC GCTGGCCTCG GTGCCCCATG CCGACCTGCG CGCCTGGATG GCGCACGAGC GCGCCCGCGG CCTCGGCGCC CGCTCGCTGG CGCGCTCGCT GTCCGCGGTG CGCCAATTCA CCGGCTGGCT GGCCGAGCGC GAGGGGGTGG ACGCGACCGC CGTCCTCTCG GCGCGCGGAC CCAAGTTCCG GCGCAAGCTG CCCCGCCCCC TCTCCGAGGG AGATGCGAAG GCGCTCCTCC TCACCGTGGC CGAGGACGGC GCGGAAGACT GGATCCGGGC GCGCGATCTT GCGGTGGTGA CGCTGCTCTA TGGCTGCGGC CTGCGGATCT CCGAGGCGTT GGGGCTGCCG GCCACCGCCC ATCCCCTGCC CGAGGTGCTG CGCATCCTCG GCAAGGGCAG CAAGGAACGG CTGGTGCCCG CCATCCCTGC GGCGCGCGAG GCGGTGGCCC GCTACGCGGC CCTCTGCCCG TTCGATCTCA CCTCCGGCCC GCTGTTCCGG GGCGCGCGCG GAGGGGCTCT CAATCCGCGG CTCGTGGCCA AGGTCATGGA GCGTGCCCGC GCGACGCTCG GCCTGCCGCC GACCGCGACG CCCCACGCGC TGCGCCACTC CTTCGCCACA CATCTGCTGA ACGCCGGAGG CGACCTCCGC GCGATCCAGG AGCTTCTGGG GCACGCGTCG CTCTCGACGA CGCAGGTCTA TACGGCGGTG GATGGCGCGC GGCTGATGGA AGTCTATGCA AGGGCCCATC CGCGGGCCTG A
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Protein sequence | MSLAIPPAAR DALEAWLTHQ RVIEGASPHT IRAYAADVAG WLAFLAGHLG EGYGLPALAS VPHADLRAWM AHERARGLGA RSLARSLSAV RQFTGWLAER EGVDATAVLS ARGPKFRRKL PRPLSEGDAK ALLLTVAEDG AEDWIRARDL AVVTLLYGCG LRISEALGLP ATAHPLPEVL RILGKGSKER LVPAIPAARE AVARYAALCP FDLTSGPLFR GARGGALNPR LVAKVMERAR ATLGLPPTAT PHALRHSFAT HLLNAGGDLR AIQELLGHAS LSTTQVYTAV DGARLMEVYA RAHPRA
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