Gene Rsph17025_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1221 
Symbol 
ID5084505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1264433 
End bp1265365 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content72% 
IMG OID640482779 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_001167427 
Protein GI146277268 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0662876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG CATTCGTGTT TCCCGGGCAG GGCGCCCAGA CCATCGGGAT GGGCCGCGCC 
CTCGCCGAGG CCTATCCGGC GGCCCGGGCG GTGTTCGAGG AAGTGGACGA GGCGCTTGGC
GAGAAGCTCT CGGCGCTGAT CTGGGAAGGG TCGATCGACG AGCTGACGCT CACCCAGAAC
GCCCAGCCGG CCCTGATGGC GACGTCGATG GCGGCGCTCG CGGCGCTGGA GGCCGAGGGG
CTGGGGATCG CCACGGCCTC GTTCGTGGCG GGCCATTCGC TGGGGGAATA TTCGGCGCTC
TGTGCGGCGC GGTCGCTGAA GCTGGCCGAT ACGGCGCGGC TGCTGCGCAT CCGCGGACAG
GCCATGCAGG AGGCGGTGCC GGTCGGCGTG GGGGCGATGG CGGCGCTTCT CGGTCTCGAC
TACGAGACGG CGGTCGAGGT GGCGCACGAG GCGGCGCAGG GCGAGGTCTG TCAGGCGGCC
AATGACAACG ATCCGGCGCA GGTGGTCGTG TCGGGCCACA AGGCCGCGGT CGAGCGGGCC
GTCGAGATCG CCAAGGGCCG GGGCGCCAAG CGGGCCATCC TTCTGCCGGT GAGCGCACCG
TTCCATTGTG CGCTGATGCA GCATGCGGCG AGCGTCATGT CCGAGGCGCT GGCGGCGGTC
GTGATCGAGG CCCCGGTCTG TCCGGTCGTG GTGAACGTCC GCGCCGAGGC CGTGTCCGAG
CCCGACCGGA TCCGGGCGCT GCTGGTGGCG CAGGTCACGG GCGCGGTCCG CTGGCGCGAG
AGCGTGATGT GGATGGAGAA TGCGGGCGTG ACCGAGTTCT GGGAGATCGG CGCGGGCAAG
GCGCTGTCGG GGATGATCAA GCGGATCGCG AAGGGCGCTG CGACGCGCGC CATCGGGACG
CCGGACGATG TGACGGCCGC CGCGGCGGTC TGA
 
Protein sequence
MSRAFVFPGQ GAQTIGMGRA LAEAYPAARA VFEEVDEALG EKLSALIWEG SIDELTLTQN 
AQPALMATSM AALAALEAEG LGIATASFVA GHSLGEYSAL CAARSLKLAD TARLLRIRGQ
AMQEAVPVGV GAMAALLGLD YETAVEVAHE AAQGEVCQAA NDNDPAQVVV SGHKAAVERA
VEIAKGRGAK RAILLPVSAP FHCALMQHAA SVMSEALAAV VIEAPVCPVV VNVRAEAVSE
PDRIRALLVA QVTGAVRWRE SVMWMENAGV TEFWEIGAGK ALSGMIKRIA KGAATRAIGT
PDDVTAAAAV